RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 TPT1P8Q9HAU6 139 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 TCF7L2Q9NQB0 619 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 CTPS2Q9NRF8 586 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 IFT52Q9Y366 437 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 C9JVG2 144 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 ADAP00813 363 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 THBS1P07996 1170 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 CHRM4P08173 479 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 CCKARP32238 428 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 CDKN2CP42773 168 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 OR3A2P47893 321 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 MRPL19P49406 292 aaKnown RBP10.56□□□□□ -0.72
KNTC1-208ENST00000535410 DSTNP60981 165 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 SLC35A1P78382 337 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 NKX6-1P78426 367 aaPredicted RBP10.56□□□□□ -0.72
KNTC1-208ENST00000535410 FUT5Q11128 374 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 FADDQ13158 208 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 PRAMEF8Q5VWM4 474 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 PRAMEF7Q5VXH5 474 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 NUFIP2Q7Z417 695 aaKnown RBP10.56□□□□□ -0.72
KNTC1-208ENST00000535410 P2RY8Q86VZ1 359 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 CXorf67Q86X51 503 aaPredicted RBP10.56□□□□□ -0.72
KNTC1-208ENST00000535410 WFDC8Q8IUA0 241 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 P3H2Q8IVL5 708 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 OR52P1PQ8NH57 321 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 PNPT1Q8TCS8 783 aaKnown RBP10.56□□□□□ -0.72
KNTC1-208ENST00000535410 MUCL1Q96DR8 90 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 OR52B2Q96RD2 323 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 CCL19Q99731 98 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 PSD2Q9BQI7 771 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 ESRP2Q9H6T0 727 aaKnown RBP10.56□□□□□ -0.72
KNTC1-208ENST00000535410 VIPAS39Q9H9C1 493 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 UBTD1Q9HAC8 227 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 PARPBPQ9NWS1 579 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 TMEM181Q9P2C4 612 aa10.56□□□□□ -0.72
KNTC1-208ENST00000535410 PRRC2AP48634 2157 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 IGKV3D-15A0A087WSY6 115 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 TMED7-TICAM2A0A0A6YYA0 188 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 CENPVL1A0A0U1RR11 272 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 PRAMEF27A3QJZ7 478 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 C5orf58C9J3I9 102 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 CLIC1O00299 241 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 SMAD9O15198 467 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 KLF4O43474 513 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 TFPTP0C1Z6 253 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 RPS4Y1P22090 263 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 CXCR1P25024 350 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 OR2B6P58173 313 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 CAPRIN1Q14444 709 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 COX20Q5RI15 118 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 MRPL2Q5T653 305 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 C1QTNF12Q5T7M4 302 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 OLIG3Q7RTU3 272 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 MAVSQ7Z434 540 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 ADGRG3Q86Y34 549 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 SLC38A5Q8WUX1 472 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 CNOT9Q92600 299 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 SLC35B4Q969S0 331 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 APH1AQ96BI3 265 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 S100PBPQ96BU1 408 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 MARK4Q96L34 752 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 POTEKPQ9BYX7 375 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 INTS9Q9NV88 658 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 CORO2BQ9UQ03 480 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 NOSIPQ9Y314 301 aaKnown RBP10.55□□□□□ -0.72
KNTC1-208ENST00000535410 TMED7Q9Y3B3 224 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 CELSR1Q9NYQ6 3014 aa10.55□□□□□ -0.72
KNTC1-208ENST00000535410 SETD2Q9BYW2 2564 aaPredicted RBP10.54□□□□□ -0.72
KNTC1-208ENST00000535410 A0A096LPI6 279 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 IGHV3-15A0A0B4J1V0 119 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 CDHR4A6H8M9 788 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 FAM171A2A8MVW0 826 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 MRPL33O75394 65 aaKnown RBP10.54□□□□□ -0.72
KNTC1-208ENST00000535410 GCM2O75603 506 aaPredicted RBP10.54□□□□□ -0.72
KNTC1-208ENST00000535410 BCHEP06276 602 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 THBDP07204 575 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 CD3EP07766 207 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 ETFAP13804 333 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 NCF2P19878 526 aaPredicted RBP10.54□□□□□ -0.72
KNTC1-208ENST00000535410 CCNA2P20248 432 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 TACR3P29371 465 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 HOXC12P31275 282 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 IDH3AP50213 366 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 ATP4BP51164 291 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 AQP5P55064 265 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 ADAM8P78325 824 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 EPS8Q12929 822 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 RGNQ15493 299 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 RNF220Q5VTB9 566 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 WBP2NLQ6ICG8 309 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 PRSS57Q6UWY2 283 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 DNAJC14Q6Y2X3 702 aaPredicted RBP10.54□□□□□ -0.72
KNTC1-208ENST00000535410 ZNF704Q6ZNC4 412 aaPredicted RBP10.54□□□□□ -0.72
KNTC1-208ENST00000535410 BHLHA15Q7RTS1 189 aaPredicted RBP10.54□□□□□ -0.72
KNTC1-208ENST00000535410 KRT73Q86Y46 540 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 UBE2J2Q8N2K1 259 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 GTF2H4Q92759 462 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 VPS33AQ96AX1 596 aa10.54□□□□□ -0.72
KNTC1-208ENST00000535410 PLPPR2Q96GM1 343 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms