RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 BEX4Q9NWD9 120 aaPredicted RBP12.48□□□□□ -0.41
SF3B2-215ENST00000534307 P2RX2Q9UBL9 471 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 ROS1P08922 2347 aa12.48□□□□□ -0.41
SF3B2-215ENST00000534307 IGKV3D-15A0A087WSY6 115 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 CDHR4A6H8M9 788 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 ZNF724A8MTY0 619 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 DBIP07108 87 aaKnown RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 FOSL1P15407 271 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 EDNRAP25101 427 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 FKBP2P26885 142 aaKnown RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 HOXC12P31275 282 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 OR3A2P47893 321 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 IDH2P48735 452 aaKnown RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 CLK1P49759 484 aaKnown RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 IDH3AP50213 366 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 CSNK2A1P68400 391 aaPredicted RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 RASGEF1BQ0VAM2 473 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 BEX5Q5H9J7 111 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 SFRP5Q5T4F7 317 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 MRPL2Q5T653 305 aaKnown RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 MTDHQ86UE4 582 aaKnown RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 LSRQ86X29 649 aaPredicted RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 FUNDC1Q8IVP5 155 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 ZNF563Q8TA94 476 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 SLC38A5Q8WUX1 472 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 WDR60Q8WVS4 1066 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 IGFBPL1Q8WX77 278 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 ZNF300Q96RE9 604 aaPredicted RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 SMR3AQ99954 134 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 EBF4Q9BQW3 602 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 OR11A1Q9GZK7 315 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 RMND5AQ9H871 391 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 FANCFQ9NPI8 374 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 SLC52A3Q9NQ40 469 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 TCF7L2Q9NQB0 619 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
SF3B2-215ENST00000534307 SPIN1Q9Y657 262 aaPredicted RBP12.47□□□□□ -0.41
SF3B2-215ENST00000534307 ZNF716A6NP11 495 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 SULT2B1O00204 365 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 DNPH1O43598 174 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 PMS2P2O95744 297 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 BMP2P12643 396 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 IL7RP16871 459 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 HTR3AP46098 478 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 DSTNP60981 165 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 H3F3AP84243 136 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 EPS8Q12929 822 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 P2RY6Q15077 328 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 PDK3Q15120 406 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 ACKR1Q16570 336 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 SLC2A7Q6PXP3 512 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 SEZ6L2Q6UXD5 910 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 Q6ZT83 130 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 Q71RC1 249 aaPredicted RBP12.46□□□□□ -0.41
SF3B2-215ENST00000534307 STEAP2Q8NFT2 490 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 LRRC8CQ8TDW0 803 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 S100PBPQ96BU1 408 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 PIP5K1AQ99755 562 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 TMEM204Q9BSN7 226 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.41
SF3B2-215ENST00000534307 HDHD5Q9BXW7 423 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 ADAM19Q9H013 955 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 RLIMQ9NVW2 624 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 OSGIN1Q9UJX0 560 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 CHST2Q9Y4C5 530 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 PCDHB14Q9Y5E9 798 aa12.46□□□□□ -0.41
SF3B2-215ENST00000534307 CUBNO60494 3623 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 TMED7-TICAM2A0A0A6YYA0 188 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 CFAP73A6NFT4 308 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 POLR3GO15318 223 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF208O43345 1280 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 ADAP00813 363 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 BCHEP06276 602 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 TFPIP10646 304 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 ACAA2P42765 397 aaKnown RBP12.45□□□□□ -0.42
SF3B2-215ENST00000534307 SLC1A3P43003 542 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 CRATP43155 626 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 POLR2HP52434 150 aaKnown RBP12.45□□□□□ -0.42
SF3B2-215ENST00000534307 SLC16A1P53985 500 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 CRISP3P54108 245 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 GNA13Q14344 377 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 TSC22D1Q15714 1073 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 C6orf10Q5SRN2 563 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 LRIF1Q5T3J3 769 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 RNF220Q5VTB9 566 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 BLOC1S3Q6QNY0 202 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF836Q6ZNA1 936 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 PRIMA1Q86XR5 153 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 VRK2Q86Y07 508 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 MSRB3Q8IXL7 192 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 PEX5LQ8IYB4 626 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 WFDC11Q8NEX6 87 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 TMEM19Q96HH6 336 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 CCDC28BQ9BUN5 200 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 VIPAS39Q9H9C1 493 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 ARGLU1Q9NWB6 273 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-215ENST00000534307 THUMPD1Q9NXG2 353 aaKnown RBP12.45□□□□□ -0.42
SF3B2-215ENST00000534307 SLC25A37Q9NYZ2 338 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 CALML5Q9NZT1 146 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms