RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, human

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-208	ENST00000534106	XK	P51811	444 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	GTF2A1	P52655	376 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	HNRNPH2	P55795	449 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	EEFSEC	P57772	596 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	PLIN5	Q00G26	463 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	CKAP4	Q07065	602 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	C2orf54	Q08AI8	447 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	PLCXD2	Q0VAA5	305 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	STX5	Q13190	355 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	SNTA1	Q13424	505 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ZSCAN26	Q16670	478 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	AP5B1	Q2VPB7	878 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	TRMT12	Q53H54	448 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	TEDDM1	Q5T9Z0	273 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ANKRD22	Q5VYY1	191 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	FAM219B	Q5XKK7	198 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF470	Q6ECI4	717 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	OR4C11	Q6IEV9	310 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	PGBD2	Q6P3X8	592 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	LEG1	Q6P5S2	330 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ANKRD16	Q6P6B7	361 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	TFAP2E	Q6VUC0	442 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	BHLHA15	Q7RTS1	189 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	GALNT10	Q86SR1	603 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	MARCH3	Q86UD3	253 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	GPR180	Q86V85	440 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	DND1	Q8IYX4	353 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	SAMD14	Q8IZD0	417 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ST13P4	Q8IZP2	240 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	SPATA6L	Q8N4H0	392 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	METTL25	Q8N6Q8	603 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	NANOGP1	Q8N7R0	232 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	SIGLECL1	Q8N7X8	197 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	GPATCH11	Q8N954	259 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	BBOF1	Q8ND07	529 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	OR2M3	Q8NG83	312 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	OR52B6	Q8NGF0	335 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	OR6K3	Q8NGY3	331 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	OR10D3	Q8NH80	312 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	FAM110D	Q8TAY7	271 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	DUSP19	Q8WTR2	217 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ABHD3	Q8WU67	409 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	GMPPA	Q96IJ6	420 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	RADIL	Q96JH8	1075 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	C1orf147	Q96MC9	270 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	PPP1R2P1	Q96PQ5	205 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	CCT8L2	Q96SF2	557 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	NAPG	Q99747	312 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	TBCD	Q9BTW9	1192 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	HDHD5	Q9BXW7	423 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	PARD6B	Q9BYG5	372 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	CENPH	Q9H3R5	247 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	COPS7B	Q9H9Q2	264 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	GPR35	Q9HC97	309 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	SNX15	Q9NRS6	342 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	IARS2	Q9NSE4	1012 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	FAIM	Q9NVQ4	179 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	MED29	Q9NX70	200 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	TREM2	Q9NZC2	230 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ASIC3	Q9UHC3	531 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	BCAP29	Q9UHQ4	241 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	LCMT1	Q9UIC8	334 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ZDHHC2	Q9UIJ5	367 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	TRMT6	Q9UJA5	497 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	PTBP2	Q9UKA9	531 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	FBXO5	Q9UKT4	447 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ICAM5	Q9UMF0	924 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	GUCA1B	Q9UMX6	200 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	PACSIN2	Q9UNF0	486 aa	Predicted RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	CORO2B	Q9UQ03	480 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	RRP15	Q9Y3B9	282 aa	Known RBP	2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ZNF175	Q9Y473	711 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	ASB4	Q9Y574	426 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	KCNE2	Q9Y6J6	123 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	NOTCH3	Q9UM47	2321 aa		2.57	□□□□□ -2
CHMP4A-208	ENST00000534106	KIAA1109	Q2LD37	5005 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	IGHV3-15	A0A0B4J1V0	119 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ZCWPW2	A0A1B0GU75	182 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	LOC390937	A0A1W2PQ73	354 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SH3PXD2B	A1X283	911 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SDR42E2	A6NKP2	422 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	OR6C76	A6NM76	312 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ATP6V1G2-DDX39B	F2Z307	99 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106		H0YHG0	523 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106		H3BQF6	201 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	GOLGA8M	H3BSY2	632 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SOCS2	O14508	198 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	LIAS	O43766	372 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TMPRSS11D	O60235	418 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	WDR47	O94967	919 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TJP3	O95049	919 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	AHSG	P02765	367 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	ANXA2	P07355	339 aa	Known RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	IGFBP1	P08833	259 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	TACSTD2	P09758	323 aa		2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	NHLRC4	P0CG21	123 aa	Predicted RBP	2.56	□□□□□ -2
CHMP4A-208	ENST00000534106	SLC35E2B	P0CK96	405 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms