RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 STK11Q15831 433 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 TTMPQ5BVD1 217 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 RPS26P11Q5JNZ5 115 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 SFRP5Q5T4F7 317 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 MRPL2Q5T653 305 aaKnown RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 SLC2A7Q6PXP3 512 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 EPGNQ6UW88 154 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF704Q6ZNC4 412 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 BHLHA15Q7RTS1 189 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 GALNT5Q7Z7M9 940 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 VRK2Q86Y07 508 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 ADGRG3Q86Y34 549 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 P3H2Q8IVL5 708 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 CMIPQ8IY22 773 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 GABRG1Q8N1C3 465 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 UBE2J2Q8N2K1 259 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 CADM2Q8N3J6 435 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 GOLGA6L1Q8N7Z2 621 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 OR52P1PQ8NH57 321 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 KISS1RQ969F8 398 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 ARL5BQ96KC2 179 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 ATP6V1G3Q96LB4 118 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 CCDC106Q9BWC9 280 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 TPT1P8Q9HAU6 139 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 BCO1Q9HAY6 547 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 GP6Q9HCN6 339 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 TCF7L2Q9NQB0 619 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 EXOSC3Q9NQT5 275 aaKnown RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 TMED7Q9Y3B3 224 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 NAV3Q8IVL0 2385 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 TMEM72A0PK05 275 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 FAM234BA2RU67 622 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 CFAP73A6NFT4 308 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 NR5A2O00482 541 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 ARHGEF9O43307 516 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 GCM2O75603 506 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-225ENST00000533704 LYZL6O75951 148 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 IGHV3-9P01782 118 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 UQCRBP14927 111 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 EDNRAP25101 427 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 LOXP28300 417 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-225ENST00000533704 TACR3P29371 465 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 OR3A2P47893 321 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 IDH3AP50213 366 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
CAPN1-225ENST00000533704 CRISP3P54108 245 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 NR1H2P55055 460 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 Q5PR19 223 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF836Q6ZNA1 936 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 C20orf204Q6ZNR8 217 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 MTDHQ86UE4 582 aaKnown RBP9.26□□□□□ -0.93
CAPN1-225ENST00000533704 PIGTQ969N2 578 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 PERPQ96FX8 193 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 TMEM19Q96HH6 336 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 EBF4Q9BQW3 602 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 HDHD5Q9BXW7 423 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 RLIMQ9NVW2 624 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 CALML5Q9NZT1 146 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 EMC3Q9P0I2 261 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 OSGIN1Q9UJX0 560 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 ING1Q9UK53 422 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-225ENST00000533704 NOSIPQ9Y314 301 aaKnown RBP9.26□□□□□ -0.93
CAPN1-225ENST00000533704 PLCE1Q9P212 2302 aa9.26□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF724A8MTY0 619 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF814B7Z6K7 855 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 C5orf58C9J3I9 102 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 CLOCKO15516 846 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 PMS2P2O95744 297 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 NUDT7P0C024 238 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 ZCCHC18P0CG32 403 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 NCF2P19878 526 aaPredicted RBP9.25□□□□□ -0.93
CAPN1-225ENST00000533704 RPS4Y1P22090 263 aaKnown RBP9.25□□□□□ -0.93
CAPN1-225ENST00000533704 CXCR1P25024 350 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 SLC1A3P43003 542 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 HTR3AP46098 478 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 MVDP53602 400 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 AQP5P55064 265 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 EPS8Q12929 822 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 ITGADQ13349 1161 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 LARS2Q15031 903 aaKnown RBP9.25□□□□□ -0.93
CAPN1-225ENST00000533704 P2RY6Q15077 328 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 TAB1Q15750 504 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 MAPK11Q15759 364 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 LIN52Q52LA3 116 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 ABLIM2Q6H8Q1 611 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 Q6ZT83 130 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 CCDC103Q8IW40 242 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF440Q8IYI8 595 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 PIGXQ8TBF5 258 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 SLC38A5Q8WUX1 472 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 DDIT4LQ96D03 193 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 THOC1Q96FV9 657 aaKnown RBP9.25□□□□□ -0.93
CAPN1-225ENST00000533704 PAIP1Q9H074 479 aaKnown RBP9.25□□□□□ -0.93
CAPN1-225ENST00000533704 OR10A4Q9H209 315 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 NGBQ9NPG2 151 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 INTS9Q9NV88 658 aaKnown RBP9.25□□□□□ -0.93
CAPN1-225ENST00000533704 TMEM181Q9P2C4 612 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF443Q9Y2A4 671 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms