RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SYT7O43581 403 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 SYNGR4O95473 234 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 P04436 131 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 OR2T7P0C7T2 308 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 HTR3AP46098 478 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 LRRC37A5PQ49AS3 106 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 TRMT12Q53H54 448 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 GARNL3Q5VVW2 1013 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 NKAIN4Q8IVV8 208 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 MSRB3Q8IXL7 192 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 OR2T27Q8NH04 317 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 HOXB13Q92826 284 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 STACQ99469 402 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC6A7Q99884 636 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 PBX4Q9BYU1 374 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 C19orf53Q9UNZ5 99 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 NAP1L6A6NFF2 107 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 ACOT7O00154 380 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 CD3GP09693 182 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 NID1P14543 1247 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 RBMXP38159 391 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 MAN2A2P49641 1150 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 AKR1D1P51857 326 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 METAP1P53582 386 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC14A1Q13336 389 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 NKAPLQ5M9Q1 402 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF836Q6ZNA1 936 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC35F3Q8IY50 421 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 FAM26EQ8N5C1 309 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 BCL2L10Q9HD36 194 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 CD93Q9NPY3 652 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 B4GALT7Q9UBV7 327 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 DCDC2BA2VCK2 349 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 IL33O95760 270 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 CD22P20273 847 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 TRHRP34981 398 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 CSNK1EP49674 416 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 EIF4EBP2Q13542 120 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 OR7A5Q15622 319 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 OR2T35Q8NGX2 323 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF486Q96H40 463 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 SDF2Q99470 211 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 NUBP2Q9Y5Y2 271 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 DOCK3Q8IZD9 2030 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 TLCD2A6NGC4 264 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 SEC14L5O43304 696 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 NR4A2P43354 598 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 PTH2RP49190 550 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 HERV-K104P61576 105 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 RPS15P62841 145 aaKnown RBP14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 AGBL4Q5VU57 503 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 LYSMD4Q5XG99 296 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 SERPINA12Q8IW75 414 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 OR52N1Q8NH53 320 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 OR14A16Q8NHC5 309 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 MSANTD3Q96H12 275 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 DUSP23Q9BVJ7 150 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF471Q9BX82 626 aaPredicted RBP14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 SIAEQ9HAT2 523 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF701Q9NV72 531 aaPredicted RBP14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 CHP2O43745 196 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 AMY2AP04746 511 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 EPHA2P29317 976 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 RPS5P46782 204 aaKnown RBP14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 ZP2Q05996 745 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 GRK1Q15835 563 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 PCGF3Q3KNV8 242 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 DHRS4L2Q6PKH6 230 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 CAMKMTQ7Z624 323 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 IQCF2Q8IXL9 164 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 POGLUT1Q8NBL1 392 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 PMM1Q92871 262 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 KIAA1143Q96AT1 154 aaPredicted RBP14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 OR5B2Q96R09 309 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 TEX101Q9BY14 249 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF576Q9H609 170 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 GSKIPQ9P0R6 139 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 UBQLN2Q9UHD9 624 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 ALG5Q9Y673 324 aa14.21□□□□□ -0.13
PCDHA3-202ENST00000532566 TSPAN11A1L157 253 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 HMX3A6NHT5 357 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 EFCAB7A8K855 629 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 NOTOA8MTQ0 251 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 BCAT2O15382 392 aaPredicted RBP14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 CEACAM5P06731 702 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 CDKN3Q16667 212 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 NAT6Q93015 286 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 ZNF587Q96SQ5 575 aaPredicted RBP14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 CDCA4Q9BXL8 241 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 ARL6Q9H0F7 186 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 HPF1Q9NWY4 346 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 MMP17Q9ULZ9 603 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 SLC7A11Q9UPY5 501 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 POLHQ9Y253 713 aa14.21□□□□□ -0.14
PCDHA3-202ENST00000532566 LOC105369274A0A096LPK9 316 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 LOC102723532A0A0G2JNH3 316 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 CHRFAM7AQ494W8 412 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SPIN3Q5JUX0 258 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 OR4N4Q8N0Y3 316 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms