RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 RPS4Y1P22090 263 aaKnown RBP20.54■□□□□ 0.88
PKP3-206ENST00000528036 CDKN2CP42773 168 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 SLC1A3P43003 542 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 IDH2P48735 452 aaKnown RBP20.54■□□□□ 0.88
PKP3-206ENST00000528036 POLR2HP52434 150 aaKnown RBP20.54■□□□□ 0.88
PKP3-206ENST00000528036 CRISP3P54108 245 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 IRX1P78414 480 aaPredicted RBP20.54■□□□□ 0.88
PKP3-206ENST00000528036 ADAM5Q6NVV9 412 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 OLIG3Q7RTU3 272 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 ZNF100Q8IYN0 542 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 ANKFN1Q8N957 763 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 WFDC11Q8NEX6 87 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 C18orf12Q96KH6 178 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 C7orf26Q96N11 449 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 TMEM181Q9P2C4 612 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 ZNF232Q9UNY5 417 aa20.54■□□□□ 0.88
PKP3-206ENST00000528036 IGHV3-15A0A0B4J1V0 119 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 CFAP73A6NFT4 308 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 GSNP06396 782 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 MRPL19P49406 292 aaKnown RBP20.53■□□□□ 0.88
PKP3-206ENST00000528036 POLR2JP52435 117 aaKnown RBP20.53■□□□□ 0.88
PKP3-206ENST00000528036 STX1BP61266 288 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 SLC9B1Q4ZJI4 515 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 LIN52Q52LA3 116 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 ABLIM2Q6H8Q1 611 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 BHLHA15Q7RTS1 189 aaPredicted RBP20.53■□□□□ 0.88
PKP3-206ENST00000528036 ADGRG3Q86Y34 549 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 ZNF611Q8N823 705 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 TMEM171Q8WVE6 324 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 ZBTB9Q96C00 473 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 NAA11Q9BSU3 229 aaPredicted RBP20.53■□□□□ 0.88
PKP3-206ENST00000528036 GSX2Q9BZM3 304 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 CXorf56Q9H5V9 222 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 TPT1P8Q9HAU6 139 aa20.53■□□□□ 0.88
PKP3-206ENST00000528036 ING1Q9UK53 422 aaPredicted RBP20.53■□□□□ 0.88
PKP3-206ENST00000528036 FAM234BA2RU67 622 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 ZNF814B7Z6K7 855 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 HS3ST1O14792 307 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 DIAPH2O60879 1101 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 PAX1P15863 534 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 SLC16A1P53985 500 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 SLC35A1P78382 337 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 LARS2Q15031 903 aaKnown RBP20.52■□□□□ 0.88
PKP3-206ENST00000528036 C1QTNF12Q5T7M4 302 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 CNOT9Q92600 299 aaKnown RBP20.52■□□□□ 0.88
PKP3-206ENST00000528036 MUCL1Q96DR8 90 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 TMEM45AQ9NWC5 275 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 USH1CQ9Y6N9 552 aa20.52■□□□□ 0.88
PKP3-206ENST00000528036 SETD2Q9BYW2 2564 aaPredicted RBP20.52■□□□□ 0.88
PKP3-206ENST00000528036 HEATR5AQ86XA9 2040 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 TMED7-TICAM2A0A0A6YYA0 188 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 C9JVG2 144 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 CD3EP07766 207 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 CRATP43155 626 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 DSTNP60981 165 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 COPZ1P61923 177 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 KRTAP21-3Q3LHN1 58 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 COX20Q5RI15 118 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 TIMM23BQ5SRD1 257 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 PRAMEF8Q5VWM4 474 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 PRAMEF7Q5VXH5 474 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 EPGNQ6UW88 154 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 LRRC8CQ8TDW0 803 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 BDH2Q9BUT1 245 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 PARPBPQ9NWS1 579 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 NOSIPQ9Y314 301 aaKnown RBP20.51■□□□□ 0.87
PKP3-206ENST00000528036 IFT52Q9Y366 437 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 TMED7Q9Y3B3 224 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 RNF115Q9Y4L5 304 aa20.51■□□□□ 0.87
PKP3-206ENST00000528036 MAP1AP78559 2803 aaPredicted RBP20.51■□□□□ 0.87
PKP3-206ENST00000528036 A0A0G2JPF8 293 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 HNRNPCL2B2RXH8 293 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 HNRNPCL3B7ZW38 293 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 POLR3GO15318 223 aaPredicted RBP20.5■□□□□ 0.87
PKP3-206ENST00000528036 HNRNPCL1O60812 293 aaKnown RBP20.5■□□□□ 0.87
PKP3-206ENST00000528036 THBS1P07996 1170 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 HNRNPCL4P0DMR1 293 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 EPS8Q12929 822 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 FADDQ13158 208 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 CAPRIN1Q14444 709 aaKnown RBP20.5■□□□□ 0.87
PKP3-206ENST00000528036 TAB1Q15750 504 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 Q5PR19 223 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 C6orf10Q5SRN2 563 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 NCMAPQ5T1S8 102 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 MRPL2Q5T653 305 aaKnown RBP20.5■□□□□ 0.87
PKP3-206ENST00000528036 FBXW9Q5XUX1 488 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 OR52P1PQ8NH57 321 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 PNPT1Q8TCS8 783 aaKnown RBP20.5■□□□□ 0.87
PKP3-206ENST00000528036 SLC35B4Q969S0 331 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 APH1AQ96BI3 265 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 OR52B2Q96RD2 323 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 ZNF300Q96RE9 604 aaPredicted RBP20.5■□□□□ 0.87
PKP3-206ENST00000528036 PIF1Q9H611 641 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 OSGIN1Q9UJX0 560 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 DSPPQ9NZW4 1301 aa20.5■□□□□ 0.87
PKP3-206ENST00000528036 CDHR4A6H8M9 788 aa20.49■□□□□ 0.87
PKP3-206ENST00000528036 CLDN24A6NM45 220 aa20.49■□□□□ 0.87
PKP3-206ENST00000528036 BCAS1O75363 584 aaPredicted RBP20.49■□□□□ 0.87
PKP3-206ENST00000528036 TFPTP0C1Z6 253 aa20.49■□□□□ 0.87
PKP3-206ENST00000528036 COX5AP20674 150 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms