RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ATP5HO75947 161 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 HTR3AP46098 478 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 OR3A2P47893 321 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 IDH3AP50213 366 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 RNF144AP50876 292 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-212ENST00000527887 KCNJ10P78508 379 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 DMTNQ08495 405 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 GNA13Q14344 377 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 MAPK14Q16539 360 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 FAM174BQ3ZCQ3 159 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 SYT14P1Q58G82 188 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 TNFAIP8L2Q6P589 184 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-212ENST00000527887 CCDC121Q6ZUS5 278 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 GRINAQ7Z429 371 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 WFDC8Q8IUA0 241 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 CLEC4FQ8N1N0 589 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 TMEM171Q8WVE6 324 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 IGFBPL1Q8WX77 278 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 S100PBPQ96BU1 408 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 ZHX1-C8orf76Q96EF9 292 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 TRNT1Q96Q11 434 aaKnown RBP12.61□□□□□ -0.39
CAPN1-212ENST00000527887 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 ZBTB18Q99592 522 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 SLC35A5Q9BS91 424 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 GSX1Q9H4S2 264 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-212ENST00000527887 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
CAPN1-212ENST00000527887 AIG1Q9NVV5 245 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 HDGFL3Q9Y3E1 203 aa12.61□□□□□ -0.39
CAPN1-212ENST00000527887 GOLGA8QA0A0J9YX86 632 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 GOLGA8OA6NCC3 632 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 CCDC154A6NI56 674 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 GOLGA8NF8WBI6 632 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 SULT2B1O00204 365 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 ADAP00813 363 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 PGRP06401 933 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 FESP07332 822 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 KITP10721 976 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 HOXB4P17483 251 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-212ENST00000527887 DIO1P49895 249 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 GPAT3Q53EU6 434 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 FRRS1Q6ZNA5 592 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 GALNT5Q7Z7M9 940 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 MTDHQ86UE4 582 aaKnown RBP12.6□□□□□ -0.39
CAPN1-212ENST00000527887 P2RY8Q86VZ1 359 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 FITM2Q8N6M3 262 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF563Q8TA94 476 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 RAB8BQ92930 207 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF524Q96C55 264 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 CCDC106Q9BWC9 280 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 POTEKPQ9BYX7 375 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 MTHFD2LQ9H903 347 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF701Q9NV72 531 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-212ENST00000527887 EMC3Q9P0I2 261 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 CHRNA9Q9UGM1 479 aa12.6□□□□□ -0.39
CAPN1-212ENST00000527887 ING1Q9UK53 422 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-212ENST00000527887 IGKV3D-15A0A087WSY6 115 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 CENPVL1A0A0U1RR11 272 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 ZNF814B7Z6K7 855 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 HMGN4O00479 90 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 FAAHO00519 579 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 SDHDO14521 159 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 GPR171O14626 319 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 SMAD9O15198 467 aaKnown RBP12.59□□□□□ -0.39
CAPN1-212ENST00000527887 H6PDO95479 791 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 KRT75O95678 551 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 PMS2P2O95744 297 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 IL6P05231 212 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 ALDOCP09972 364 aaKnown RBP12.59□□□□□ -0.39
CAPN1-212ENST00000527887 IDO1P14902 403 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 PTH2RP49190 550 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 UFM1P61960 85 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 CHRNEQ04844 493 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 KRT72Q14CN4 511 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 DNAJC14Q6Y2X3 702 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-212ENST00000527887 MAVSQ7Z434 540 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 COX4I2Q96KJ9 171 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 TEX37Q96LM6 180 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 OR52E6Q96RD3 313 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 QRSL1Q9H0R6 528 aaKnown RBP12.59□□□□□ -0.39
CAPN1-212ENST00000527887 TCF7L2Q9NQB0 619 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 TRAPPC4Q9Y296 219 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 RNF115Q9Y4L5 304 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
CAPN1-212ENST00000527887 IGHV3-15A0A0B4J1V0 119 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 AGAP5A6NIR3 686 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 HEXAP06865 529 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 CD3EP07766 207 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 TFPIP10646 304 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 UQCRBP14927 111 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 CASP9P55211 416 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 FUT5Q11128 374 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 BNIP1Q12981 228 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 TAB1Q15750 504 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 GSTA3Q16772 222 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 ZSWIM7Q19AV6 140 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 TIMM23BQ5SRD1 257 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms