RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 REXO5Q96IC2 774 aaKnown RBP9.8□□□□□ -0.84
NEDD8-204ENST00000526430 CDRT15Q96T59 188 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 SH3GL1Q99961 368 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 ECSITQ9BQ95 431 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 C1orf21Q9H246 121 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 DSN1Q9H410 356 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 EXO5Q9H790 373 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 ZNF703Q9H7S9 590 aaPredicted RBP9.8□□□□□ -0.84
NEDD8-204ENST00000526430 METTL7AQ9H8H3 244 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 UBTD1Q9HAC8 227 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 YAE1D1Q9NRH1 226 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 RLIMQ9NVW2 624 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 GALNT8Q9NY28 637 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 NDRG3Q9UGV2 375 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 C15orf41Q9Y2V0 281 aa9.8□□□□□ -0.84
NEDD8-204ENST00000526430 A8MV72 311 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 DEFB108AA8MXU0 73 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 SIAH2O43255 324 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 NDUFB5O43674 189 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 TPST2O60704 377 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 CBR3O75828 277 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 HPNP05981 417 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 PRG2P13727 222 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 CD247P20963 164 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 ATP6V1C1P21283 382 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 PSMA4P25789 261 aaKnown RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 PCGF2P35227 344 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 MSX2P35548 267 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 ACAA2P42765 397 aaKnown RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 ANXA11P50995 505 aaKnown RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 RPP38P78345 283 aaKnown RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 C17orf67Q0P5P2 114 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 SKP2Q13309 424 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 VEZF1Q14119 521 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 SF3B4Q15427 424 aaKnown RBP eCLIP9.79□□□□□ -0.843e-15■■■■□ 24.1
NEDD8-204ENST00000526430 DUSP7Q16829 419 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 WIPI1Q5MNZ9 446 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 NSUN5P2Q63ZY6 315 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 PACS2Q86VP3 889 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 IFNEQ86WN2 208 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 MICU2Q8IYU8 434 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 DEFB107AQ8IZN7 70 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 RNF148Q8N7C7 305 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 C11orf65Q8NCR3 313 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 FAM156AQ8NDB6 213 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 HIPK4Q8NE63 616 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 OR1J4Q8NGS1 313 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 OR52P1PQ8NH57 321 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 BBS10Q8TAM1 723 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 NEIL3Q8TAT5 605 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 POC1BQ8TC44 478 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 GPR119Q8TDV5 335 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 OIT3Q8WWZ8 545 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 TAMM41Q96BW9 452 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 SPATA9Q9BWV2 254 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 RBM24Q9BX46 236 aaKnown RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 LAT2Q9GZY6 243 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 ACKR4Q9NPB9 350 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 QPCTLQ9NXS2 382 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 KLRF1Q9NZS2 232 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 CARD8Q9Y2G2 431 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 MRPS18CQ9Y3D5 142 aaKnown RBP9.79□□□□□ -0.84
NEDD8-204ENST00000526430 MALRD1Q5VYJ5 2156 aa9.79□□□□□ -0.84
NEDD8-204ENST00000526430 C15orf38-AP3S2A0A0A6YYH1 394 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 CDHR4A6H8M9 788 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 MBD3L3A6NE82 208 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 CD8B2A6NJW9 211 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 KDM4EB2RXH2 506 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 SCDO00767 359 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 NTN1O95631 604 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 DBIP07108 87 aaKnown RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 LINGO3P0C6S8 592 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 PABPC4LP0CB38 370 aaKnown RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 HSD17B1P14061 328 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 AQP1P29972 269 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 PCYT1AP49585 367 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 MS4A2Q01362 244 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 ETFDHQ16134 617 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 CYP51A1Q16850 503 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 EIPR1Q53HC9 387 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 MRPL2Q5T653 305 aaKnown RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 PGM2L1Q6PCE3 622 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 TSEN54Q7Z6J9 526 aaKnown RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 ARPINQ7Z6K5 226 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 TSPYL5Q86VY4 417 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 GRAMD2AQ8IUY3 354 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 OR2T12Q8NG77 320 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 OR4D11Q8NGI4 311 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 MBD3L2Q8NHZ7 208 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 PHOSPHO1Q8TCT1 267 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 JSRP1Q96MG2 331 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-204ENST00000526430 PRR14Q9BWN1 585 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 TBL1XR1Q9BZK7 514 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 PLA2G12AQ9BZM1 189 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 OR2B2Q9GZK3 357 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 SPAG4Q9NPE6 437 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 TMEM160Q9NX00 188 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 CALML5Q9NZT1 146 aa9.78□□□□□ -0.84
NEDD8-204ENST00000526430 ZNF443Q9Y2A4 671 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms