RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TRIB1Q96RU8 372 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 ZNF559Q9BR84 538 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 PRR14Q9BWN1 585 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 TRIM2Q9C040 744 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 MMADHCQ9H3L0 296 aaPredicted RBP11.62□□□□□ -0.55
SMPD1-202ENST00000526280 TESQ9UGI8 421 aaKnown RBP11.62□□□□□ -0.55
SMPD1-202ENST00000526280 CHRNA9Q9UGM1 479 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 BAG5Q9UL15 447 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 TMED7Q9Y3B3 224 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 ARHGAP21Q5T5U3 1957 aa11.62□□□□□ -0.55
SMPD1-202ENST00000526280 ASH1LQ9NR48 2969 aaKnown RBP11.62□□□□□ -0.55
SMPD1-202ENST00000526280 TNFSF11O14788 317 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 FMO6PO60774 539 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 ZG16O60844 167 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 NCK1P16333 377 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 TIMP3P35625 211 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 MAP2K6P52564 334 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 CARD18P57730 90 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 SELENOWP63302 87 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 CEACAM7Q14002 265 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 NPTX1Q15818 432 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 DNAL1Q4LDG9 190 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 HBMQ6B0K9 141 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 GLYATQ6IB77 296 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 RANBP3LQ86VV4 465 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 FAM156AQ8NDB6 213 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 OR4D11Q8NGI4 311 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 OR6T1Q8NGN1 323 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 OR10D3Q8NH80 312 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 OR2V1Q8NHB1 315 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 SLC25A43Q8WUT9 341 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 RND1Q92730 232 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 PROX1Q92786 737 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 WNT2BQ93097 391 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 C3orf49Q96BT1 292 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 DENND2DQ9H6A0 471 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 PAQR5Q9NXK6 330 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 CLCF1Q9UBD9 225 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 EGFL7Q9UHF1 273 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 SLC9A8Q9Y2E8 581 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 SH3GLB1Q9Y371 365 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 SPIN1Q9Y657 262 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 NCOA6Q14686 2063 aaPredicted RBP11.61□□□□□ -0.55
SMPD1-202ENST00000526280 KIAA1549Q9HCM3 1950 aa11.61□□□□□ -0.55
SMPD1-202ENST00000526280 A0A1B0GWA3 101 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MBD3L4A6NDZ8 208 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MBD3L3A6NE82 208 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MBD3L5A6NJ08 208 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ZNF208O43345 1280 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TOXO94900 526 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TGM6O95932 706 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 RNF224P0DH78 156 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 CXCR1P25024 350 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SLC7A1P30825 629 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 CEACAM8P31997 349 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MSX2P35548 267 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 EIF1AXP47813 144 aaKnown RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 CLK1P49759 484 aaKnown RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 OR1Q1Q15612 314 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SGCBQ16585 318 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SYT14P1Q58G82 188 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 PDSS1Q5T2R2 415 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 RIPPLY2Q5TAB7 128 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 PLXDC2Q6UX71 529 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 CBLL1Q75N03 491 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ATG4DQ86TL0 474 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 RBM45Q8IUH3 476 aaKnown RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 OR10Q1Q8NGQ4 319 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MBD3L2Q8NHZ7 208 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SSC4DQ8WTU2 575 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 DNAJA4Q8WW22 397 aaPredicted RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 LZICQ8WZA0 190 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 OSTF1Q92882 214 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 FAM162AQ96A26 154 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TPD52L3Q96J77 140 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 MCHR1Q99705 422 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 PCDHAC1Q9H158 963 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 COQ10BQ9H8M1 238 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 GORASP2Q9H8Y8 452 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 RNPEPL1Q9HAU8 725 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 C12orf10Q9HB07 376 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TMEM27Q9HBJ8 222 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 RPS6KB2Q9UBS0 482 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 PRPF19Q9UMS4 504 aaKnown RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ZNF175Q9Y473 711 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 DOCK7Q96N67 2140 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SPTBN1Q01082 2364 aaKnown RBP11.6□□□□□ -0.55
SMPD1-202ENST00000526280 A0A0G2JNJ9 132 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 A0A1W2PNR3 127 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SLC22A20A6NK97 555 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 CXCL13O43927 109 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 GMNNO75496 209 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 ZNF682O95780 498 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 SERPINA1P01009 418 aa11.6□□□□□ -0.55
SMPD1-202ENST00000526280 TFPIP10646 304 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms