RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 NDUFA7O95182 113 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ATP1A1P05023 1023 aaKnown RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 FCER2P06734 321 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ALOX5P09917 674 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 DARSP14868 501 aaKnown RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 HOXB8P17481 243 aaPredicted RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 LAP3P28838 519 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 SSTR1P30872 391 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 CBX5P45973 191 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 HSPA13P48723 471 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 NR0B1P51843 470 aaKnown RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 RWDD2BP57060 319 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 PRPS1P60891 318 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 DYNLL1P63167 89 aaKnown RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 STX3Q13277 289 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ART3Q13508 389 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 VGLL4Q14135 290 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ITIH4Q14624 930 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 VAMP3Q15836 100 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 WDR38Q5JTN6 314 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 CLVS2Q5SYC1 327 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ZNF658Q5TYW1 1059 aaPredicted RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 C1orf94Q6P1W5 598 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 RFWD3Q6PCD5 774 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 KCNIP4Q6PIL6 250 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 LEKR1Q6ZMV7 388 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 NCCRP1Q6ZVX7 275 aaPredicted RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 NUDCD3Q8IVD9 361 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 CIARTQ8N365 385 aaPredicted RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 ALLCQ8N6M5 410 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 SMYD1Q8NB12 490 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 OR5T1Q8NG75 326 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ENKURQ8TC29 256 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 CAPSLQ8WWF8 208 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 SEPT8Q92599 483 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 OPTNQ96CV9 577 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 MRPL53Q96EL3 112 aaKnown RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 NSL1Q96IY1 281 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 PSD2Q9BQI7 771 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 RHNO1Q9BSD3 238 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 TUBGCP2Q9BSJ2 902 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 CCM2Q9BSQ5 444 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 GANQ9H2C0 597 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 CHST11Q9NPF2 352 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 PXMP2Q9NR77 195 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 PHPT1Q9NRX4 125 aaPredicted RBP4.15□□□□□ -1.75
CD44-220ENST00000525688 ZFP57Q9NU63 452 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 NLGN3Q9NZ94 848 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 PTTG3PQ9NZH4 202 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ADA2Q9NZK5 511 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 TAAR2Q9P1P5 351 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ZNF229Q9UJW7 825 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 RPH3ALQ9UNE2 315 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 POFUT2Q9Y2G5 429 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 TNFRSF18Q9Y5U5 241 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 ZNF532Q9HCE3 1301 aa4.15□□□□□ -1.75
CD44-220ENST00000525688 LAMB1P07942 1786 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 OTOFQ9HC10 1997 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 MTMR11A4FU01 709 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 C17orf105B2RV13 164 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 BTN3A3O00478 584 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 SERPIND1P05546 499 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 HIST1H2AGP0C0S8 130 aaPredicted RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 CD59P13987 128 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 TNNI1P19237 187 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 PSMA2P25787 234 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 YWHABP31946 246 aaKnown RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 CYLC1P35663 651 aaPredicted RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 CDC34P49427 236 aaPredicted RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 EMP2P54851 167 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 KCNK10P57789 538 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 UBE2G2P60604 165 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 ERVFC1-1P60608 527 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 PPIAP62937 165 aaKnown RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 ARL16Q0P5N6 197 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 EXOSC2Q13868 293 aaKnown RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 TMEM132DQ14C87 1099 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 TTMPQ5BVD1 217 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 XKR6Q5GH73 641 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 XKR4Q5GH76 650 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 LGSNQ5TDP6 509 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 MFSD14CQ5VZR4 134 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 OR4F3Q6IEY1 312 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 H3F3CQ6NXT2 135 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 PAGE2Q7Z2X7 111 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 ABHD12BQ7Z5M8 362 aaPredicted RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 ISCA2Q86U28 154 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 PARGQ86W56 976 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.14□□□□□ -1.75
CD44-220ENST00000525688 CCDC50Q8IVM0 306 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 SLC38A6Q8IZM9 456 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 TEX26Q8N6G2 289 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 ZNF383Q8NA42 475 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 TMEM104Q8NE00 496 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 TTLQ8NG68 377 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 OR2L3Q8NG85 312 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 OR7G2Q8NG99 324 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 OR10H4Q8NGA5 316 aa4.14□□□□□ -1.75
CD44-220ENST00000525688 HIST1H2ACQ93077 130 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms