RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZNF300Q96RE9 604 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-203ENST00000525013 CALML5Q9NZT1 146 aa16.48■□□□□ 0.23
CAPN1-203ENST00000525013 ING1Q9UK53 422 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-203ENST00000525013 TMED7-TICAM2A0A0A6YYA0 188 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 TMEM247A6NEH6 219 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 CFAP73A6NFT4 308 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 TGDSO95455 350 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 BCHEP06276 602 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 FPR1P21462 350 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 RPS4Y1P22090 263 aaKnown RBP16.47■□□□□ 0.23
CAPN1-203ENST00000525013 FKBP2P26885 142 aaKnown RBP16.47■□□□□ 0.23
CAPN1-203ENST00000525013 LOXP28300 417 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-203ENST00000525013 OR3A2P47893 321 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 IDH3AP50213 366 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 POLR2HP52434 150 aaKnown RBP16.47■□□□□ 0.23
CAPN1-203ENST00000525013 MVDP53602 400 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 RIPPLY3P57055 190 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 OR2B6P58173 313 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 MAPK11Q15759 364 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 SFRP5Q5T4F7 317 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.47■□□□□ 0.23
CAPN1-203ENST00000525013 GALNT5Q7Z7M9 940 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 ZNF100Q8IYN0 542 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 OR52P1PQ8NH57 321 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 SLC38A5Q8WUX1 472 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 KISS1RQ969F8 398 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-203ENST00000525013 PIGTQ969N2 578 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 PLPPR2Q96GM1 343 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 OR10A4Q9H209 315 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 RLIMQ9NVW2 624 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 EMC3Q9P0I2 261 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 TMED7Q9Y3B3 224 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 HDGFL3Q9Y3E1 203 aa16.47■□□□□ 0.23
CAPN1-203ENST00000525013 USF3Q68DE3 2245 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 ZNF724A8MTY0 619 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 ZNF814B7Z6K7 855 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 SMPD2O60906 423 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 TFPTP0C1Z6 253 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 TACR3P29371 465 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 SLC1A3P43003 542 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 CLK1P49759 484 aaKnown RBP16.46■□□□□ 0.23
CAPN1-203ENST00000525013 CRISP3P54108 245 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 NR1H2P55055 460 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 NKX6-1P78426 367 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-203ENST00000525013 P2RY6Q15077 328 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 SLC2A7Q6PXP3 512 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 HDXQ7Z353 690 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 VRK2Q86Y07 508 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 ZNF440Q8IYI8 595 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 WFDC11Q8NEX6 87 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 GTF2H4Q92759 462 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 CCL19Q99731 98 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 EBF4Q9BQW3 602 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 CACYBPQ9HB71 228 aaKnown RBP16.46■□□□□ 0.23
CAPN1-203ENST00000525013 PRSS50Q9UI38 385 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 OSGIN1Q9UJX0 560 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 PCDHB14Q9Y5E9 798 aa16.46■□□□□ 0.23
CAPN1-203ENST00000525013 RAI1Q7Z5J4 1906 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 PMS2P2O95744 297 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 GKN3PP0CG01 181 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 AQP5P55064 265 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 EPS8Q12929 822 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 ITGADQ13349 1161 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 CAPRIN1Q14444 709 aaKnown RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 LIN52Q52LA3 116 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 RPS26P11Q5JNZ5 115 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF836Q6ZNA1 936 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF704Q6ZNC4 412 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 C20orf204Q6ZNR8 217 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 Q6ZT83 130 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 BHLHA15Q7RTS1 189 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 LSRQ86X29 649 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 DDIT4LQ96D03 193 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 TMEM19Q96HH6 336 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 PAIP1Q9H074 479 aaKnown RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 INTS9Q9NV88 658 aaKnown RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 THUMPD1Q9NXG2 353 aaKnown RBP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 TMEM181Q9P2C4 612 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF232Q9UNY5 417 aa16.45■□□□□ 0.22
CAPN1-203ENST00000525013 NIPBLQ6KC79 2804 aaeCLIP16.45■□□□□ 0.22
CAPN1-203ENST00000525013 TMEM72A0PK05 275 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 CDHR4A6H8M9 788 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 CLIC1O00299 241 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 NR5A2O00482 541 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 FAAHO00519 579 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 ARHGEF9O43307 516 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 LYZL6O75951 148 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 PLAUP00749 431 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 EDNRAP25101 427 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 LARS2Q15031 903 aaKnown RBP16.44■□□□□ 0.22
CAPN1-203ENST00000525013 TAB1Q15750 504 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 ABLIM2Q6H8Q1 611 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 P3H2Q8IVL5 708 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 CCDC103Q8IW40 242 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 UBE2J2Q8N2K1 259 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 CADM2Q8N3J6 435 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 PIGXQ8TBF5 258 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 HSD17B8Q92506 261 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 PIP5K1AQ99755 562 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 CCDC28BQ9BUN5 200 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms