RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 BEND4Q6ZU67 534 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 ZNF550Q7Z398 422 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 NUFIP2Q7Z417 695 aaKnown RBP17.04■□□□□ 0.32
FBXO28-205ENST00000523990 LSRQ86X29 649 aaPredicted RBP17.04■□□□□ 0.32
FBXO28-205ENST00000523990 ZNF440Q8IYI8 595 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 ARL5BQ96KC2 179 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 MED18Q9BUE0 208 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 IKZF5Q9H5V7 419 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 OSGIN1Q9UJX0 560 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 TRIM33Q9UPN9 1127 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 SULT2B1O00204 365 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 FESP07332 822 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 YES1P07947 543 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 GKN3PP0CG01 181 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 ARAFP10398 606 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 UQCRBP14927 111 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 PPIBP23284 216 aaKnown RBP17.03■□□□□ 0.32
FBXO28-205ENST00000523990 FKBP2P26885 142 aaKnown RBP17.03■□□□□ 0.32
FBXO28-205ENST00000523990 SLC1A3P43003 542 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 POLR2HP52434 150 aaKnown RBP17.03■□□□□ 0.32
FBXO28-205ENST00000523990 LARS2Q15031 903 aaKnown RBP17.03■□□□□ 0.32
FBXO28-205ENST00000523990 POU4F3Q15319 338 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 ABLIM2Q6H8Q1 611 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 TFAP2EQ6VUC0 442 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 STAC2Q6ZMT1 411 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 STK32CQ86UX6 486 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 TACO1Q9BSH4 297 aaKnown RBP17.03■□□□□ 0.32
FBXO28-205ENST00000523990 KLHL4Q9C0H6 718 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 OR11A1Q9GZK7 315 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 ST6GALNAC2Q9UJ37 374 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 HDGFL3Q9Y3E1 203 aa17.03■□□□□ 0.32
FBXO28-205ENST00000523990 RAI1Q7Z5J4 1906 aaPredicted RBP17.03■□□□□ 0.32
FBXO28-205ENST00000523990 TEP1Q99973 2627 aaKnown RBP17.02■□□□□ 0.32
FBXO28-205ENST00000523990 TMED7-TICAM2A0A0A6YYA0 188 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 A0A1W2PPR1 153 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 CASKO14936 926 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 SIAH2O43255 324 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 PMS2P2O95744 297 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 TFPIP10646 304 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 CRYGSP22914 178 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 TACR3P29371 465 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 ACAA2P42765 397 aaKnown RBP17.02■□□□□ 0.31
FBXO28-205ENST00000523990 CLK1P49759 484 aaKnown RBP17.02■□□□□ 0.31
FBXO28-205ENST00000523990 RASGEF1BQ0VAM2 473 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 ZSWIM7Q19AV6 140 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 DLEU7Q6UYE1 221 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 C22orf34Q6ZV56 151 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 CLIP4Q8N3C7 705 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 BBS10Q8TAM1 723 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 NINJ1Q92982 152 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 DNAJA3Q96EY1 480 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 SPATA9Q9BWV2 254 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 PLEKHF2Q9H8W4 249 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 ZNF226Q9NYT6 803 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 IFT52Q9Y366 437 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 TMED7Q9Y3B3 224 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 ITPR3Q14573 2671 aa17.02■□□□□ 0.31
FBXO28-205ENST00000523990 F8P00451 2351 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 PRR14LQ5THK1 2151 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 TMEM72A0PK05 275 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 DEFB108AA8MXU0 73 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 ZNF208O43345 1280 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 DNPH1O43598 174 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 PGM3O95394 542 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 GCNT6Q5T4J0 391 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 ZNF300Q96RE9 604 aaPredicted RBP17.01■□□□□ 0.31
FBXO28-205ENST00000523990 CPPED1Q9BRF8 314 aaPredicted RBP17.01■□□□□ 0.31
FBXO28-205ENST00000523990 TMEM120AQ9BXJ8 343 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 ADAM19Q9H013 955 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 CACYBPQ9HB71 228 aaKnown RBP17.01■□□□□ 0.31
FBXO28-205ENST00000523990 FANCFQ9NPI8 374 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 C6orf203Q9P0P8 240 aaPredicted RBP17.01■□□□□ 0.31
FBXO28-205ENST00000523990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.01■□□□□ 0.31
FBXO28-205ENST00000523990 LEF1Q9UJU2 399 aaPredicted RBP17.01■□□□□ 0.31
FBXO28-205ENST00000523990 CORO2BQ9UQ03 480 aa17.01■□□□□ 0.31
FBXO28-205ENST00000523990 C5orf58C9J3I9 102 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 GCM2O75603 506 aaPredicted RBP17■□□□□ 0.31
FBXO28-205ENST00000523990 PRG2P13727 222 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 ETS2P15036 469 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 GPX2P18283 190 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 CCNA2P20248 432 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 PSMB1P20618 241 aaKnown RBP17■□□□□ 0.31
FBXO28-205ENST00000523990 MAP2K6P52564 334 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 IST1P53990 364 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 ZNF311Q5JNZ3 666 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 METTL21CQ5VZV1 264 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 ANKRD34AQ69YU3 496 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 PAMR1Q6UXH9 720 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 DHDDSQ86SQ9 333 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 SERPINA11Q86U17 422 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 MTDHQ86UE4 582 aaKnown RBP17■□□□□ 0.31
FBXO28-205ENST00000523990 GABRG1Q8N1C3 465 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 DPP10Q8N608 796 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 NFKBIDQ8NI38 313 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 DDIT4LQ96D03 193 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 TMEM38AQ9H6F2 299 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 PRDM4Q9UKN5 801 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 ZNF232Q9UNY5 417 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 NDUFAF1Q9Y375 327 aa17■□□□□ 0.31
FBXO28-205ENST00000523990 PRRC2AP48634 2157 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms