RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 GUCY2DQ02846 1103 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 RUNX1T1Q06455 604 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 C2orf54Q08AI8 447 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 RASGEF1BQ0VAM2 473 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 LSAMPQ13449 338 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 MLC1Q15049 377 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 PRSS53Q2L4Q9 553 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 TMEM176BQ3YBM2 270 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 SPDYE7PQ495Y7 208 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 CFAP157Q5JU67 520 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 MFSD12Q6NUT3 480 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 ZNF544Q6NX49 715 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 SLC46A3Q7Z3Q1 461 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 NUFIP2Q7Z417 695 aaKnown RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 GALNT5Q7Z7M9 940 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 GABRG1Q8N1C3 465 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 OR2L13Q8N349 312 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 OR52N5Q8NH56 324 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 ZNF483Q8TF39 744 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 PPP1R14AQ96A00 147 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 PPCDCQ96CD2 204 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 ZMYND19Q96E35 227 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 APIPQ96GX9 242 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 C1orf159Q96HA4 380 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 ADGRG7Q96K78 797 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 PAFAH2Q99487 392 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 LMF2Q9BU23 707 aaKnown RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 ACPTQ9BZG2 426 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 GLIPR2Q9H4G4 154 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 MYOZ1Q9NP98 299 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 RRAGDQ9NQL2 400 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 SERINC1Q9NRX5 453 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 UPB1Q9UBR1 384 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 B3GALT5Q9Y2C3 310 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 COA3Q9Y2R0 106 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 POLR3HQ9Y535 204 aaPredicted RBP5.5□□□□□ -1.53
PABPC1-220ENST00000522658 COL6A5A8TX70 2615 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 USF3Q68DE3 2245 aa5.5□□□□□ -1.53
PABPC1-220ENST00000522658 ATRQ13535 2644 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 STAB1Q9NY15 2570 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 HEATR5AQ86XA9 2040 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 A0A1W2PQD3 144 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 DPRXA6NFQ7 191 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 OR5H1A6NKK0 313 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 MYO1GB0I1T2 1018 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 SHISA9B4DS77 424 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 TRIM49D1C9J1S8 452 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 H7C417 338 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 NDUFS8O00217 210 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 RGS14O43566 566 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 SPRY1O43609 319 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-220ENST00000522658 RAMP1O60894 148 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 NTN1O95631 604 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 CHEK2O96017 543 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 NGFRP08138 427 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 IGHV4-31P0DP07 118 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 TFPIP10646 304 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 CREB1P16220 341 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 IGFBP5P24593 272 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 HSD17B3P37058 310 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 HPCAL1P37235 193 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 ECI1P42126 302 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 OR3A2P47893 321 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 P2RX1P51575 399 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 EFNA4P52798 201 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 RAC3P60763 192 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 IRX1P78414 480 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-220ENST00000522658 TGFBR3Q03167 851 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 LCP2Q13094 533 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 CBFBQ13951 182 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 ZNF678Q5SXM1 525 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 FAM120AOSQ5T036 256 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 OR7E24Q6IFN5 339 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 C8orf74Q6P047 294 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 SHQ1Q6PI26 577 aaKnown RBP5.49□□□□□ -1.53
PABPC1-220ENST00000522658 CASP12Q6UXS9 341 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 MTERF4Q7Z6M4 381 aaKnown RBP5.49□□□□□ -1.53
PABPC1-220ENST00000522658 RFLNBQ8N5W9 214 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 CCNYL1Q8N7R7 359 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 ZNF540Q8NDQ6 660 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 SPATA4Q8NEY3 305 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 OR10H5Q8NGA6 315 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 LILRB1Q8NHL6 650 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-220ENST00000522658 FAM110BQ8TC76 370 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 HTRA1Q92743 480 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 APH1AQ96BI3 265 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 ELP4Q96EB1 424 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 AMDHD1Q96NU7 426 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 OR5B2Q96R09 309 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 VRK1Q99986 396 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-220ENST00000522658 SRXN1Q9BYN0 137 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 HOXD1Q9GZZ0 328 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 TSPYL1Q9H0U9 437 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 MID1IP1Q9NPA3 183 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 ASB6Q9NWX5 421 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 TAS2R16Q9NYV7 291 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 GRHL1Q9NZI5 618 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 SH3BP4Q9P0V3 963 aa5.49□□□□□ -1.53
PABPC1-220ENST00000522658 FAF1Q9UNN5 650 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms