RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 MED18Q9BUE0 208 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 OR11A1Q9GZK7 315 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 RABEP2Q9H5N1 569 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 ZNF385DQ9H6B1 395 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 PLEKHF2Q9H8W4 249 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 BCL2L10Q9HD36 194 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 A4GALTQ9NPC4 353 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 C6orf203Q9P0P8 240 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 KLHL9Q9P2J3 617 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 ST6GALNAC2Q9UJ37 374 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 OSGIN1Q9UJX0 560 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 ZNF232Q9UNY5 417 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 ZNF443Q9Y2A4 671 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 GMEB1Q9Y692 573 aa15.91■□□□□ 0.14
TRAPPC9-211ENST00000521700 FREM1Q5H8C1 2179 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 TMED7-TICAM2A0A0A6YYA0 188 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 SIAH2O43255 324 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 FESP07332 822 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 THBS1P07996 1170 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 CRYGSP22914 178 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 TACR3P29371 465 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 ACAA2P42765 397 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 SLC1A3P43003 542 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 CLK1P49759 484 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 POLR2HP52434 150 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 CSNK2A1P68400 391 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 RASGEF1BQ0VAM2 473 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 LARS2Q15031 903 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 RNF220Q5VTB9 566 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 PRAMEF8Q5VWM4 474 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 PRAMEF7Q5VXH5 474 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 TFAP2EQ6VUC0 442 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 MTDHQ86UE4 582 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 ZNF440Q8IYI8 595 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 NINJ1Q92982 152 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 ZNF775Q96BV0 537 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 ZC3HAV1LQ96H79 300 aaKnown RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 SIKE1Q9BRV8 207 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 ADAM19Q9H013 955 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 BCO1Q9HAY6 547 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 CCM2LQ9NUG4 571 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 ZNF226Q9NYT6 803 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 PLEKHA6Q9Y2H5 1048 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 TMED7Q9Y3B3 224 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 HDGFL3Q9Y3E1 203 aa15.9■□□□□ 0.14
TRAPPC9-211ENST00000521700 AKAP9Q99996 3911 aa15.89■□□□□ 0.14
TRAPPC9-211ENST00000521700 A0A0G2JND7 137 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 TMEM72A0PK05 275 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 DEFB108AA8MXU0 73 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 PGM3O95394 542 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 PMS2P2O95744 297 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 PPIBP23284 216 aaKnown RBP15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 ART1P52961 327 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 ZSWIM7Q19AV6 140 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 DLEU7Q6UYE1 221 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 ZNF300Q96RE9 604 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 TACO1Q9BSH4 297 aaKnown RBP15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 SPATA9Q9BWV2 254 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 IKZF5Q9H5V7 419 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 FANCFQ9NPI8 374 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 TRIM33Q9UPN9 1127 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 GPR52Q9Y2T5 361 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 IFT52Q9Y366 437 aa15.89■□□□□ 0.13
TRAPPC9-211ENST00000521700 ZNF724A8MTY0 619 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 ZNF208O43345 1280 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 THBDP07204 575 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 PRG2P13727 222 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 UQCRBP14927 111 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 GPX2P18283 190 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 ZNF311Q5JNZ3 666 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 GCNT6Q5T4J0 391 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 GABRG1Q8N1C3 465 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 NFKBIDQ8NI38 313 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 BBS10Q8TAM1 723 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 RSPO3Q9BXY4 272 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 TMEM181Q9P2C4 612 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 LEF1Q9UJU2 399 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 PRDM4Q9UKN5 801 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 TRAPPC4Q9Y296 219 aa15.88■□□□□ 0.13
TRAPPC9-211ENST00000521700 ZC3H12DA2A288 527 aaKnown RBP15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 ZNF814B7Z6K7 855 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 C5orf58C9J3I9 102 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 DNPH1O43598 174 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 GCM2O75603 506 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 ARAFP10398 606 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 IMPDH2P12268 514 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 PPP3CBP16298 524 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 PSMB1P20618 241 aaKnown RBP15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 DNASE1P24855 282 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 EDNRAP25101 427 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 MAP2K6P52564 334 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 OR2B6P58173 313 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 CDK6Q00534 326 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 RUNDC3AQ59EK9 446 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 METTL21CQ5VZV1 264 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 ABLIM2Q6H8Q1 611 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 PAMR1Q6UXH9 720 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 SPNS3Q6ZMD2 512 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 SERPINA11Q86U17 422 aa15.87■□□□□ 0.13
TRAPPC9-211ENST00000521700 RETREG3Q86VR2 466 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms