RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	KRT73	Q86Y46	540 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	FUNDC1	Q8IVP5	155 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	STEAP2	Q8NFT2	490 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	ZNF524	Q96C55	264 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	SPATA5L1	Q9BVQ7	753 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	BCL2L10	Q9HD36	194 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	NPHS2	Q9NP85	383 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	TRAPPC4	Q9Y296	219 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	CCDC168	Q8NDH2	2452 aa		21.54	■■□□□ 1.04
CNOT7-204	ENST00000518885	TMED7-TICAM2	A0A0A6YYA0	188 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	ZNF724	A8MTY0	619 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	EIF1B	O60739	113 aa	Known RBP	21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	BCAS1	O75363	584 aa	Predicted RBP	21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	SASH3	O75995	380 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	RAF1	P04049	648 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	FES	P07332	822 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	PSMB1	P20618	241 aa	Known RBP	21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	KEAP1	Q14145	624 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	ZNF311	Q5JNZ3	666 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	METTL21C	Q5VZV1	264 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	PAMR1	Q6UXH9	720 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	PIGX	Q8TBF5	258 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	NRGN	Q92686	78 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	SLC35B4	Q969S0	331 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	FOXC2	Q99958	501 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	PSD2	Q9BQI7	771 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	SPATA9	Q9BWV2	254 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	LEF1	Q9UJU2	399 aa	Predicted RBP	21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	DCTN4	Q9UJW0	460 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	TMED7	Q9Y3B3	224 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	GMEB1	Q9Y692	573 aa		21.53	■■□□□ 1.04
CNOT7-204	ENST00000518885	IGHV3-15	A0A0B4J1V0	119 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	AP3D1	O14617	1153 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	GPR171	O14626	319 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	ANGPT2	O15123	496 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	SMAD9	O15198	467 aa	Known RBP	21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	TROVE2	P10155	538 aa	Known RBP eCLIP	21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	CXCR1	P25024	350 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	TACR3	P29371	465 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	CCKAR	P32238	428 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	IST1	P53990	364 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	P2RY6	Q15077	328 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	PDK3	Q15120	406 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	MAPK11	Q15759	364 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	GCNT6	Q5T4J0	391 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	WBP2NL	Q6ICG8	309 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	TFAP2E	Q6VUC0	442 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	STAC2	Q6ZMT1	411 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	ZNF836	Q6ZNA1	936 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	GALNT5	Q7Z7M9	940 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	VRK2	Q86Y07	508 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	ADGRG3	Q86Y34	549 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	TSPEAR	Q8WU66	669 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	NAA11	Q9BSU3	229 aa	Predicted RBP	21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	TMEM181	Q9P2C4	612 aa		21.52	■■□□□ 1.04
CNOT7-204	ENST00000518885	AKAP9	Q99996	3911 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885		A0A0G2JND7	137 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	ETS2	P15036	469 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	IL32	P24001	234 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	SLC35A1	P78382	337 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	POU4F3	Q15319	338 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	TESK1	Q15569	626 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	PIK3IP1	Q96FE7	263 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	ZC3HAV1L	Q96H79	300 aa	Known RBP	21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	ACTR6	Q9GZN1	396 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	RLIM	Q9NVW2	624 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	OSGIN1	Q9UJX0	560 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	NDUFAF1	Q9Y375	327 aa		21.51	■■□□□ 1.03
CNOT7-204	ENST00000518885	CNOT4	O95628	575 aa	Known RBP	21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	HOXB9	P17482	250 aa	Predicted RBP	21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	CCNA2	P20248	432 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	NR1H2	P55055	460 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	OR2B6	P58173	313 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	PLAUR	Q03405	335 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	REEP3	Q6NUK4	255 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	SSX8	Q7RTT4	187 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	NUFIP2	Q7Z417	695 aa	Known RBP	21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	ZNF100	Q8IYN0	542 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	CADM2	Q8N3J6	435 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	MBD6	Q96DN6	1003 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	THOC1	Q96FV9	657 aa	Known RBP	21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	PLEKHF2	Q9H8W4	249 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	NGB	Q9NPG2	151 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	CCM2L	Q9NUG4	571 aa	Predicted RBP	21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	SLC25A37	Q9NYZ2	338 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	C6orf203	Q9P0P8	240 aa	Predicted RBP	21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	PLEKHA6	Q9Y2H5	1048 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	HEATR5A	Q86XA9	2040 aa		21.5	■■□□□ 1.03
CNOT7-204	ENST00000518885	PRORSD1P	A6NEY8	169 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	PGM3	O95394	542 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	SLC6A2	P23975	617 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	OR3A2	P47893	321 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	BEX5	Q5H9J7	111 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	PAGE3	Q5JUK9	113 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	ANKRD34A	Q69YU3	496 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	ABLIM2	Q6H8Q1	611 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885		Q6ZT83	130 aa		21.49	■■□□□ 1.03
CNOT7-204	ENST00000518885	GABRG1	Q8N1C3	465 aa		21.49	■■□□□ 1.03

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms