RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 BHLHA15Q7RTS1 189 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 GABRG1Q8N1C3 465 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 OR52P1PQ8NH57 321 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 DDIT4LQ96D03 193 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 MAELQ96JY0 434 aaKnown RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 CCDC106Q9BWC9 280 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 HDHD5Q9BXW7 423 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 POTEKPQ9BYX7 375 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 SLC38A1Q9H2H9 487 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 MTHFD2LQ9H903 347 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 TPT1P8Q9HAU6 139 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 BCO1Q9HAY6 547 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 NGBQ9NPG2 151 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 EXOSC3Q9NQT5 275 aaKnown RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 SDR39U1Q9NRG7 319 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 TMED7Q9Y3B3 224 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 NUP214P35658 2090 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 MED13LQ71F56 2210 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 ACANP16112 2415 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 TMEM72A0PK05 275 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 FAM234BA2RU67 622 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 C5orf58C9J3I9 102 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 NR5A2O00482 541 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 KLF11O14901 512 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 KLF4O43474 513 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 DNAJA2O60884 412 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 GCM2O75603 506 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 PLAUP00749 431 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 CD3EP07766 207 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 NID1P14543 1247 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ADSLP30566 484 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 HTR3AP46098 478 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 OR3A2P47893 321 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 COPZ1P61923 177 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 PLAURQ03405 335 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ITGADQ13349 1161 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 P2RY6Q15077 328 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 TAB1Q15750 504 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 SHEQ5VZ18 495 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ABLIM2Q6H8Q1 611 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 SLC2A7Q6PXP3 512 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 CASP12Q6UXS9 341 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF836Q6ZNA1 936 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 Q6ZT83 130 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 MTDHQ86UE4 582 aaKnown RBP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 VRK2Q86Y07 508 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF440Q8IYI8 595 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 PIGXQ8TBF5 258 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 TMEM171Q8WVE6 324 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 HSD17B8Q92506 261 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 AKAP1Q92667 903 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 APH1AQ96BI3 265 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 TMEM19Q96HH6 336 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ARL5BQ96KC2 179 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ATP6V1G3Q96LB4 118 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 C7orf26Q96N11 449 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 OR10A4Q9H209 315 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 GSX1Q9H4S2 264 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ESRP2Q9H6T0 727 aaKnown RBP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 SLCO1B3Q9NPD5 702 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 TCF7L2Q9NQB0 619 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 RLIMQ9NVW2 624 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 CALML5Q9NZT1 146 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 OSGIN1Q9UJX0 560 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF443Q9Y2A4 671 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 NOSIPQ9Y314 301 aaKnown RBP9.38□□□□□ -0.91
SPIDR-205ENST00000518060 HDGFL3Q9Y3E1 203 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 RNF115Q9Y4L5 304 aa9.38□□□□□ -0.91
SPIDR-205ENST00000518060 NF1P21359 2839 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 CIB4A0PJX0 185 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 CCT8L1PA6NM43 557 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF724A8MTY0 619 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF814B7Z6K7 855 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 GPR171O14626 319 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 HS3ST1O14792 307 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 SMAD7O15105 426 aaKnown RBP9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ADAM11O75078 769 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 RAD51DO75771 328 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 PMS2P2O95744 297 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 GKN3PP0CG01 181 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 CXCR1P25024 350 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 EDNRAP25101 427 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 FKBP2P26885 142 aaKnown RBP9.37□□□□□ -0.91
SPIDR-205ENST00000518060 LOXP28300 417 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-205ENST00000518060 SLC1A3P43003 542 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 MAGEA8P43361 318 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 AQP5P55064 265 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 SLC35A1P78382 337 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 EPS8Q12929 822 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 LARS2Q15031 903 aaKnown RBP9.37□□□□□ -0.91
SPIDR-205ENST00000518060 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 MSANTD1Q6ZTZ1 278 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 YTHDF3Q7Z739 585 aaKnown RBP9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ADGRG3Q86Y34 549 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 CCDC103Q8IW40 242 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 SLC38A5Q8WUX1 472 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 MUCL1Q96DR8 90 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 PIP5K1AQ99755 562 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 NAA11Q9BSU3 229 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-205ENST00000518060 RAD21L1Q9H4I0 556 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms