RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	LINC00303	Q3SY05	128 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	C9orf129	Q5T035	196 aa	Known RBP	4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	MEDAG	Q5VYS4	303 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	ADAMTSL2	Q86TH1	951 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	AMZ2	Q86W34	360 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	KRTAP11-1	Q8IUC1	163 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	CCNY	Q8ND76	341 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	FGF13	Q92913	245 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	CFAP53	Q96M91	514 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	SLC38A10	Q9HBR0	1119 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	TRPV5	Q9NQA5	729 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	FZR1	Q9UM11	496 aa		4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	STRAP	Q9Y3F4	350 aa	Known RBP	4.01	□□□□□ -1.77
LINC01088-208	ENST00000511895	MN1	Q10571	1320 aa	Predicted RBP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	MYLK	Q15746	1914 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	TRBV7-9	A0A0J9YWB2	115 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	SLC17A2	O00624	439 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	OLFM2	O95897	454 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	H2AFZ	P0C0S5	128 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	SDC1	P18827	310 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	CD52	P31358	61 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	RBMX	P38159	391 aa	Known RBP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	SRY	Q05066	204 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	PUDP	Q08623	228 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	MGAT3	Q09327	533 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	IL18R1	Q13478	541 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	AGK	Q53H12	422 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	PAGE2B	Q5JRK9	111 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	BEND6	Q5SZJ8	279 aa	Predicted RBP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	LGSN	Q5TDP6	509 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	TMEM179	Q6ZVK1	233 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	BATF2	Q8N1L9	274 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	GPR137C	Q8N3F9	429 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	CADM2	Q8N3J6	435 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	ZNF397	Q8NF99	534 aa	Predicted RBP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	OR13F1	Q8NGS4	319 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	C11orf24	Q96F05	449 aa	Predicted RBP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	MSANTD3	Q96H12	275 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	CYYR1	Q96J86	154 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	NDUFAF3	Q9BU61	184 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	CARD6	Q9BX69	1037 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	NT5C3A	Q9H0P0	336 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	SIRPD	Q9H106	197 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	OPN3	Q9H1Y3	402 aa	Predicted RBP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	FAM114A2	Q9NRY5	505 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	DCAF13	Q9NV06	445 aa	Known RBP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	AATF	Q9NY61	560 aa	Known RBP eCLIP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	ANAPC11	Q9NYG5	84 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	NYAP2	Q9P242	653 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	TRIM10	Q9UDY6	481 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	APPL1	Q9UKG1	709 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	ABCG2	Q9UNQ0	655 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4	□□□□□ -1.77
LINC01088-208	ENST00000511895	ESPL1	Q14674	2120 aa		4	□□□□□ -1.77
LINC01088-208	ENST00000511895	HELZ	P42694	1942 aa	Known RBP	3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	STK17B	O94768	372 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	NOL4	O94818	638 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	LYPD3	O95274	346 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	CYP11B1	P15538	503 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	CD1E	P15812	388 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	OAS2	P29728	719 aa	Known RBP	3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	NUMB	P49757	651 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	IL9R	Q01113	521 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	RAB35	Q15286	201 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	PARP6	Q2NL67	630 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	GLYR1	Q49A26	553 aa	Predicted RBP	3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	P4HA3	Q7Z4N8	544 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	GOLGA7	Q7Z5G4	137 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	ZNF677	Q86XU0	584 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	GPR65	Q8IYL9	337 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	LRRC43	Q8N309	656 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	ZNF564	Q8TBZ8	553 aa	Predicted RBP	3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	URGCP	Q8TCY9	931 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	KIR2DL4	Q99706	377 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	PLA2G2F	Q9BZM2	168 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	EXOSC3	Q9NQT5	275 aa	Known RBP	3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	ADAM22	Q9P0K1	906 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	MAP1A	P78559	2803 aa	Predicted RBP	3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	VWA8	A3KMH1	1905 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	MYH8	P13535	1937 aa		3.99	□□□□□ -1.77
LINC01088-208	ENST00000511895	WNK1	Q9H4A3	2382 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	RYR3	Q15413	4870 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895		A0A1W2PNU3	283 aa	Predicted RBP	3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895		H0Y9J4	135 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	NUDT21	O43809	227 aa	Known RBP	3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	APBB3	O95704	486 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	CCDC166	P0CW27	439 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	SMIM10L2A	P0DMW4	78 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	SMIM10L2B	P0DMW5	78 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	BCKDHB	P21953	392 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	TRPC1	P48995	793 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	STK19	P49842	368 aa	Predicted RBP	3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	STX17	P56962	302 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	MYBPC1	Q00872	1141 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	PNCK	Q6P2M8	343 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	RABEPK	Q7Z6M1	372 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	WDR36	Q8NI36	951 aa	Known RBP	3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	PPTC7	Q8NI37	304 aa		3.98	□□□□□ -1.77
LINC01088-208	ENST00000511895	SETD7	Q8WTS6	366 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms