RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PRSS41Q7RTY9 318 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 GLT6D1Q7Z4J2 308 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 PCGF5Q86SE9 256 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 LACC1Q8IV20 430 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 FBXW8Q8N3Y1 598 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 CSNK1A1LQ8N752 337 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 CCNYQ8ND76 341 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 MCUQ8NE86 351 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 OR2L3Q8NG85 312 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 OR2L8Q8NGY9 312 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 BLOC1S5Q8TDH9 187 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 TSLPQ969D9 159 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 OR2A5Q96R48 311 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 TNFRSF13CQ96RJ3 184 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 COPS8Q99627 209 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 DRC3Q9H069 523 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 SEMA6AQ9H2E6 1030 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 LIN28AQ9H9Z2 209 aaKnown RBP5.29□□□□□ -1.56
USP53-206ENST00000510737 RANGRFQ9HD47 186 aaPredicted RBP5.29□□□□□ -1.56
USP53-206ENST00000510737 PARVAQ9NVD7 372 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 ARL5AQ9Y689 179 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 DSCAMO60469 2012 aa5.29□□□□□ -1.56
USP53-206ENST00000510737 SNRNP200O75643 2136 aaKnown RBP5.29□□□□□ -1.56
USP53-206ENST00000510737 RAI1Q7Z5J4 1906 aaPredicted RBP5.29□□□□□ -1.56
USP53-206ENST00000510737 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 IGHV4-4A0A075B6R2 117 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 IGHV4-30-2A0A087WSY4 118 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 A0A1W2PPV9 198 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 TMEM89A2RUT3 159 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 SLCO1B7G3V0H7 640 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 H0YIG0 161 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 LIN7AO14910 233 aaPredicted RBP5.28□□□□□ -1.56
USP53-206ENST00000510737 STX7O15400 261 aaKnown RBP5.28□□□□□ -1.56
USP53-206ENST00000510737 P2RX6O15547 441 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 TCF21O43680 179 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 TMCC2O75069 709 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 CDC123O75794 336 aaPredicted RBP5.28□□□□□ -1.56
USP53-206ENST00000510737 DUS4LO95620 317 aaKnown RBP5.28□□□□□ -1.56
USP53-206ENST00000510737 ACADSP16219 412 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 MTIF2P46199 727 aaKnown RBP5.28□□□□□ -1.56
USP53-206ENST00000510737 DNASE1L1P49184 302 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 CASP9P55211 416 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 OR4D2P58180 307 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 VLDLRP98155 873 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 FAM53BQ14153 422 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 SQLEQ14534 574 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 ABRAXAS2Q15018 415 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 CCDC183Q5T5S1 534 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 CYB5R2Q6BCY4 276 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 PQLC3Q8N755 202 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 OR4K2Q8NGD2 314 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 CCDC34Q96HJ3 373 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 AGPAT1Q99943 283 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 FAM173AQ9BQD7 235 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 DPH7Q9BTV6 452 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 DEFB126Q9BYW3 111 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 EXO5Q9H790 373 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 PPCSQ9HAB8 311 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 CRLS1Q9UJA2 301 aa5.28□□□□□ -1.56
USP53-206ENST00000510737 WNK1Q9H4A3 2382 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 IGHV4-61A0A0C4DH41 118 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 IGKV1-8A0A0C4DH67 115 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 KRT87PA6NCN2 255 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 C15orf62A8K5M9 175 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 SGK494L7N484 410 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 EPHB6O15197 1021 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 OR6B1O95007 311 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 VENTXO95231 258 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 EPOP01588 193 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 IGHV4-59P01825 116 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 IGHV4-31P0DP07 118 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 HSD3B1P14060 373 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 KLK7P49862 253 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 MRPS34P82930 218 aaKnown RBP5.27□□□□□ -1.57
USP53-206ENST00000510737 PPIDQ08752 370 aaKnown RBP5.27□□□□□ -1.57
USP53-206ENST00000510737 CCSMST1Q4G0I0 132 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 KCTD11Q693B1 232 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 GSTA5Q7RTV2 222 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 SLC26A11Q86WA9 606 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 LMNTD2Q8IXW0 634 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 APCDD1LQ8NCL9 501 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 OR13C4Q8NGS5 318 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 CFAP61Q8NHU2 1237 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 NEIL3Q8TAT5 605 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 HEXDCQ8WVB3 486 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 ST8SIA4Q92187 359 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 SYN2Q92777 582 aaPredicted RBP5.27□□□□□ -1.57
USP53-206ENST00000510737 FOXN4Q96NZ1 517 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 FICDQ9BVA6 458 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 GANQ9H2C0 597 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 VPS37BQ9H9H4 285 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 ZNF226Q9NYT6 803 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 HACD3Q9P035 362 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 RCC2Q9P258 522 aaKnown RBP5.27□□□□□ -1.57
USP53-206ENST00000510737 ZNF223Q9UK11 482 aaPredicted RBP5.27□□□□□ -1.57
USP53-206ENST00000510737 YARS2Q9Y2Z4 477 aaKnown RBP5.27□□□□□ -1.57
USP53-206ENST00000510737 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.27□□□□□ -1.57
USP53-206ENST00000510737 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
USP53-206ENST00000510737 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms