RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SYT14P1Q58G82 188 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 RNF220Q5VTB9 566 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 ANKRD34AQ69YU3 496 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 REEP3Q6NUK4 255 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 C3orf33Q6P1S2 294 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 FCRLAQ7L513 359 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 FAM214BQ7L5A3 538 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 GRINAQ7Z429 371 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
SNF8-206ENST00000509989 TSPYL5Q86VY4 417 aaPredicted RBP12.09□□□□□ -0.47
SNF8-206ENST00000509989 CCDC103Q8IW40 242 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 SMYD1Q8NB12 490 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 GPR32P1Q8NGA4 272 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 OR4D11Q8NGI4 311 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 TSPEARQ8WU66 669 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 OIT3Q8WWZ8 545 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 TMEM234Q8WY98 164 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 LRRC58Q96CX6 371 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 RCN3Q96D15 328 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 TMEM38AQ9H6F2 299 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 CHRNA9Q9UGM1 479 aa12.09□□□□□ -0.47
SNF8-206ENST00000509989 MCTS1Q9ULC4 181 aaKnown RBP12.09□□□□□ -0.47
SNF8-206ENST00000509989 CCT8L1PA6NM43 557 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 EVPLLA8MZ36 301 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 SIAH2O43255 324 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 PPIBP23284 216 aaKnown RBP12.08□□□□□ -0.48
SNF8-206ENST00000509989 SLC7A1P30825 629 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 LSP1P33241 339 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 APOBEC1P41238 236 aaKnown RBP12.08□□□□□ -0.48
SNF8-206ENST00000509989 SLC1A3P43003 542 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 KIR2DL3P43628 341 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 CPA2P48052 419 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 PCBP3P57721 371 aaKnown RBP12.08□□□□□ -0.48
SNF8-206ENST00000509989 LARS2Q15031 903 aaKnown RBP12.08□□□□□ -0.48
SNF8-206ENST00000509989 TSC22D1Q15714 1073 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 EXOC3L2Q2M3D2 409 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 OR2A2Q6IF42 318 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 TMPPEQ6ZT21 453 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 ZNF550Q7Z398 422 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 GDF7Q7Z4P5 450 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 SPATA21Q7Z572 469 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 MTDHQ86UE4 582 aaKnown RBP12.08□□□□□ -0.48
SNF8-206ENST00000509989 RBM45Q8IUH3 476 aaKnown RBP12.08□□□□□ -0.48
SNF8-206ENST00000509989 P3H2Q8IVL5 708 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 PMM1Q92871 262 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 C3orf49Q96BT1 292 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 GMPPAQ96IJ6 420 aaPredicted RBP12.08□□□□□ -0.48
SNF8-206ENST00000509989 LURAP1Q96LR2 239 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 LIME1Q9H400 295 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 KLHL13Q9P2N7 655 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 CAPN7Q9Y6W3 813 aa12.08□□□□□ -0.48
SNF8-206ENST00000509989 A0A1W2PPR1 153 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 TMEM229AB2RXF0 380 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 M0R3H8 397 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 SULT2B1O00204 365 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 FAAHO00519 579 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 MSTNO14793 375 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
SNF8-206ENST00000509989 MFN2O95140 757 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 CRHP06850 196 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 ETS2P15036 469 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 POLR2HP52434 150 aaKnown RBP12.07□□□□□ -0.48
SNF8-206ENST00000509989 RAC3P60763 192 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 GNGT1P63211 74 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 NPTX1Q15818 432 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 DUSP7Q16829 419 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 CYP51A1Q16850 503 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 PDSS1Q5T2R2 415 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 PRAMEF8Q5VWM4 474 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 PRAMEF7Q5VXH5 474 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 CALHM3Q86XJ0 350 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 CPNE4Q96A23 557 aaPredicted RBP12.07□□□□□ -0.48
SNF8-206ENST00000509989 TAMM41Q96BW9 452 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 C14orf79Q96F83 325 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 ZNF583Q96ND8 569 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 ZNF559Q9BR84 538 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 GPATCH1Q9BRR8 931 aaKnown RBP12.07□□□□□ -0.48
SNF8-206ENST00000509989 MYLK2Q9H1R3 596 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 PIGMQ9H3S5 423 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 PLSCR4Q9NRQ2 329 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 CMTM6Q9NX76 183 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 THUMPD1Q9NXG2 353 aaKnown RBP12.07□□□□□ -0.48
SNF8-206ENST00000509989 STOML1Q9UBI4 398 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 PRSS50Q9UI38 385 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 IFT52Q9Y366 437 aa12.07□□□□□ -0.48
SNF8-206ENST00000509989 TMEM247A6NEH6 219 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 ZNF716A6NP11 495 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 M0QX08 132 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 SNX3O60493 162 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 CYTIPO60759 359 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 PLGP00747 810 aaPredicted RBP12.06□□□□□ -0.48
SNF8-206ENST00000509989 CD8BP10966 210 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 FCGR2AP12318 317 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 COX4I1P13073 169 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 TNFRSF1BP20333 461 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 CD247P20963 164 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 SLC6A2P23975 617 aa12.06□□□□□ -0.48
SNF8-206ENST00000509989 PRKAR1BP31321 381 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms