RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 NUDT6P53370 316 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 CLDN8P56748 225 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 PGS1Q32NB8 556 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 EMBQ6PCB8 327 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 SLC22A25Q6T423 547 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 FRRS1Q6ZNA5 592 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 P2RY8Q86VZ1 359 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 MUC15Q8N387 334 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 CNOT9Q92600 299 aaKnown RBP13.95□□□□□ -0.18
RAB40C-202ENST00000509637 APOPT1Q96IL0 206 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 AMBRA1Q9C0C7 1298 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 C20orf27Q9GZN8 174 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 SAP130Q9H0E3 1048 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 SLC7A10Q9NS82 523 aa13.95□□□□□ -0.18
RAB40C-202ENST00000509637 NOSIPQ9Y314 301 aaKnown RBP13.95□□□□□ -0.18
RAB40C-202ENST00000509637 TLDC2A0PJX2 215 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 ZC3H12DA2A288 527 aaKnown RBP13.94□□□□□ -0.18
RAB40C-202ENST00000509637 VWC2LB2RUY7 222 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 M0R1B8 84 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 ANKRD28O15084 1053 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 KIAA0513O60268 411 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 STX11O75558 287 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 TFPIP10646 304 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 PRPS1L1P21108 318 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 SLC16A1P53985 500 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 NRF1Q16656 503 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 ATP6AP1LQ52LC2 224 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 TSPO2Q5TGU0 170 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 TNFAIP8L2Q6P589 184 aaPredicted RBP13.94□□□□□ -0.18
RAB40C-202ENST00000509637 IL17RELQ6ZVW7 336 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 ANKRD46Q86W74 232 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 ZIC4Q8N9L1 334 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 MIPOL1Q8TD10 442 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 TCP10LQ8TDR4 215 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 MALT1Q9UDY8 824 aa13.94□□□□□ -0.18
RAB40C-202ENST00000509637 RNF103-CHMP3A0A140T963 221 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 CIB4A0PJX0 185 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 TMEM72A0PK05 275 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 H7C417 338 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 PMS2P2O95744 297 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 KRT16P08779 473 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 ZNF16P17020 682 aaPredicted RBP13.93□□□□□ -0.18
RAB40C-202ENST00000509637 PGCP20142 388 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 PTAFRP25105 342 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 MAPK1P28482 360 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 RPL3P39023 403 aaKnown RBP13.93□□□□□ -0.18
RAB40C-202ENST00000509637 FABP6P51161 128 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 UBE2J2Q8N2K1 259 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 XAGE5Q8WWM1 108 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 APH1AQ96BI3 265 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 MOAP1Q96BY2 351 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 TUBGCP3Q96CW5 907 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 SLC35G5Q96KT7 338 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 PPP1R36Q96LQ0 422 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 ADAD1Q96M93 576 aaKnown RBP13.93□□□□□ -0.18
RAB40C-202ENST00000509637 SOX7Q9BT81 388 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 TAS2R16Q9NYV7 291 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 CHRNA9Q9UGM1 479 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 FLVCR1Q9Y5Y0 555 aa13.93□□□□□ -0.18
RAB40C-202ENST00000509637 CCT8L1PA6NM43 557 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 IFNA2P01563 188 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 IGFBP5P24593 272 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 ETV4P43268 484 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 OR2B6P58173 313 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 EMX2Q04743 252 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 LGALS3BPQ08380 585 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 MAPK11Q15759 364 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 SWI5Q1ZZU3 235 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 SAXO2Q658L1 398 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 TMEM108Q6UXF1 575 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 EIF3MQ7L2H7 374 aaKnown RBP13.92□□□□□ -0.18
RAB40C-202ENST00000509637 ANKFN1Q8N957 763 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 ROPN1LQ96C74 230 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 TEX37Q96LM6 180 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 KCNK17Q96T54 332 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 INPP5KQ9BT40 448 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 PRR14Q9BWN1 585 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 AKTIPQ9H8T0 292 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 SLC17A5Q9NRA2 495 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 SERINC1Q9NRX5 453 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 ATAD3AQ9NVI7 634 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 ASB6Q9NWX5 421 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 MID2Q9UJV3 735 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 OSGIN1Q9UJX0 560 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 SVEP1Q4LDE5 3571 aa13.92□□□□□ -0.18
RAB40C-202ENST00000509637 ATP6V1G2-DDX39BF2Z307 99 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 RNASET2O00584 256 aaKnown RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 CPSF4O95639 269 aaKnown RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 F12P00748 615 aaPredicted RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 BPGMP07738 259 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 APOBEC1P41238 236 aaKnown RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 IDH2P48735 452 aaKnown RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 CSNK2A1P68400 391 aaPredicted RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 KCNJ10P78508 379 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 SLC17A1Q14916 467 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 RAB35Q15286 201 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 CLEC2AQ6UVW9 174 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms