RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TMLHEQ9NVH6 421 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 FGFR1OP2Q9NVK5 253 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 BABAM1Q9NWV8 329 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 ALKBH4Q9NXW9 302 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 GPR83Q9NYM4 423 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 PTTG3PQ9NZH4 202 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 MAT2BQ9NZL9 334 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 FOXJ2Q9P0K8 574 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 SLC23A1Q9UHI7 598 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 SLC12A6Q9UHW9 1150 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 PRPF19Q9UMS4 504 aaKnown RBP4.14□□□□□ -1.75
NIPBL-206ENST00000509429 FOXA2Q9Y261 457 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-206ENST00000509429 SNX24Q9Y343 169 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 CLIC4Q9Y696 253 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 MARF1Q9Y4F3 1742 aaKnown RBP4.14□□□□□ -1.75
NIPBL-206ENST00000509429 MROH7Q68CQ1 1323 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF532Q9HCE3 1301 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 NOTCH4Q99466 2003 aa4.14□□□□□ -1.75
NIPBL-206ENST00000509429 ANKARQ7Z5J8 1434 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CAMTA1Q9Y6Y1 1673 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 MRC1P22897 1456 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 PRSS38A1L453 326 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 TBC1D3FA6NER0 549 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 AGAP5A6NIR3 686 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF785A8K8V0 405 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM233B4DJY2 109 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 C9J4A7 227 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 E7EWF7 191 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 H3BNX3 289 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 J3KTA2 159 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 M0QXV9 152 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 M0R036 132 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 DHHO43323 396 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF749O43361 778 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 N4BP1O75113 896 aaKnown RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 TRMUO75648 421 aaKnown RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 TM7SF2O76062 418 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 AQP8O94778 261 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 OR4F21O95013 312 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 OR6A2O95222 327 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 PSMG1O95456 288 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 BCL10O95999 233 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 HLA-DOAP06340 250 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF806P0C7X5 589 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 HAPLN1P10915 354 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 IFI30P13284 250 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 MMP9P14780 707 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 IGFBP2P18065 325 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 PGAM1P18669 254 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CSNK2A2P19784 350 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 EFNA1P20827 205 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 PBX1P40424 430 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CSKP41240 450 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 RFX3P48380 749 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 PPOXP50336 477 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 LGALS4P56470 323 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 TAS2R39P59534 338 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CD81P60033 236 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 RPL26P61254 145 aaKnown RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CDR2Q01850 454 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 OGDHQ02218 1023 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 FOLH1Q04609 750 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CXCL9Q07325 125 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 SRSF1Q07955 248 aaKnown RBP eCLIP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 DLG1Q12959 904 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 OXA1LQ15070 435 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 TRAM1Q15629 374 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 MPPED2Q15777 294 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 MICBQ29980 383 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 FAM214AQ32MH5 1076 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 RFX4Q33E94 735 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 KHDC1Q4VXA5 237 aaKnown RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 FGD3Q5JSP0 725 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 MED27Q6P2C8 311 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF790Q6PG37 636 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 GLDNQ6ZMI3 551 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 DPY19L2P2Q6ZN68 376 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 ESPNLQ6ZVH7 1005 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF767PQ75MW2 155 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 FAM220AQ7Z4H9 259 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 TMED4Q7Z7H5 227 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 PEG10Q86TG7 708 aaKnown RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 GPAT4Q86UL3 456 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 LYSMD2Q8IV50 215 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CTAGE3PQ8IX95 158 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 YAF2Q8IY57 180 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 C2orf73Q8N5S3 287 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 HORMAD2Q8N7B1 307 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 OR1M1Q8NGA1 313 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 OR10S1Q8NGN2 331 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 OR9G4Q8NGQ1 327 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 LNX1Q8TBB1 728 aaPredicted RBP4.13□□□□□ -1.75
NIPBL-206ENST00000509429 M1APQ8TC57 530 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 CD200R1Q8TD46 325 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 BPIFB1Q8TDL5 484 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 NUDCD2Q8WVJ2 157 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 ADAMTS14Q8WXS8 1223 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 SUSD6Q92537 303 aa4.13□□□□□ -1.75
NIPBL-206ENST00000509429 FAM131CQ96AQ9 280 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms