RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ADORA2A-AS1P86434 159 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 DMTNQ08495 405 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 PON3Q15166 354 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 RNPS1Q15287 305 aaKnown RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 SLC25A35Q3KQZ1 300 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TMEM176BQ3YBM2 270 aaPredicted RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 LRRC23Q53EV4 343 aaPredicted RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 RTL6Q6ICC9 239 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 ZNF613Q6PF04 617 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 ULK3Q6PHR2 472 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 POMZP3Q6PJE2 187 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 GGNQ86UU5 652 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 MCEMP1Q8IX19 187 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 SLC43A2Q8N370 569 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 SMYD1Q8NB12 490 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 OR52E4Q8NGH9 312 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 POC1BQ8TC44 478 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 ITLN2Q8WWU7 325 aaPredicted RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 FIG4Q92562 907 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 OSTF1Q92882 214 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TAMM41Q96BW9 452 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 SDCCAG3Q96C92 435 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 SLC47A1Q96FL8 570 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 OR5B2Q96R09 309 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 ADAM19Q9H013 955 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 C1orf21Q9H246 121 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 MUC13Q9H3R2 512 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TMEM185BQ9H7F4 350 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 GP6Q9HCN6 339 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 CHST11Q9NPF2 352 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 CTPS2Q9NRF8 586 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 ARL8BQ9NVJ2 186 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 MAGEL2Q9UJ55 1249 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 RPS6KA6Q9UK32 745 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TRAPPC4Q9Y296 219 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 TMED7Q9Y3B3 224 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 KLF2Q9Y5W3 355 aaPredicted RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 BAHCC1Q9P281 2608 aa8.22□□□□□ -1.09
NUP54-207ENST00000508583 NCOA6Q14686 2063 aaPredicted RBP8.22□□□□□ -1.09
NUP54-207ENST00000508583 DOPEY1Q5JWR5 2465 aa8.21□□□□□ -1.09
NUP54-207ENST00000508583 ELOA3DA6NLF2 546 aaPredicted RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 A8MVM7 634 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 B2RBV5 119 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 SULT2B1O00204 365 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 EIF1BO60739 113 aaKnown RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 PMS2P2O95744 297 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 OPN1SWP03999 348 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 FESP07332 822 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 RNF224P0DH78 156 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 TMIGD3P0DMS9 266 aaPredicted RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 CD247P20963 164 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 HTR1EP28566 365 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 CEACAM8P31997 349 aaPredicted RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 SUCLG1P53597 346 aaKnown RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 PLAURQ03405 335 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 BNIP2Q12982 314 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 NRF1Q16656 503 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 DUSP7Q16829 419 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 CTU2Q2VPK5 515 aaKnown RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 ELOA3BQ3SY89 546 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 DNAL1Q4LDG9 190 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 CYBRD1Q53TN4 286 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 ALG10BQ5I7T1 473 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 PPP4R4Q6NUP7 873 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 C6orf89Q6UWU4 347 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 TMPPEQ6ZT21 453 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 ADGRG3Q86Y34 549 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 DEFB107AQ8IZN7 70 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 ATP6V1C2Q8NEY4 427 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 ELOA3Q8NG57 546 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 LILRB4Q8NHJ6 448 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 STK35Q8TDR2 534 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 GEMIN6Q8WXD5 167 aaKnown RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 FAM162AQ96A26 154 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 GMPPAQ96IJ6 420 aaPredicted RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 ADGRG7Q96K78 797 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 EPYCQ99645 322 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 ARHGDIGQ99819 225 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 TAPBPLQ9BX59 468 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 POTEKPQ9BYX7 375 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 PCDHAC1Q9H158 963 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 PIGMQ9H3S5 423 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 SLC24A3Q9HC58 644 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 FANCFQ9NPI8 374 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 KCNJ16Q9NPI9 418 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 KLHL9Q9P2J3 617 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 FOXD3Q9UJU5 478 aaPredicted RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 OSGIN1Q9UJX0 560 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 PRPF19Q9UMS4 504 aaKnown RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 SAMD4AQ9UPU9 718 aaKnown RBP8.21□□□□□ -1.1
NUP54-207ENST00000508583 EMC9Q9Y3B6 208 aa8.21□□□□□ -1.1
NUP54-207ENST00000508583 DOCK7Q96N67 2140 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 A0A0G2JNJ9 132 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 A0A0J9YW62 118 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 OR2T1O43869 369 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 CXCL13O43927 109 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 TPST1O60507 370 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 ADAM11O75078 769 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 ATP5HO75947 161 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 IFNW1P05000 195 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms