RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNRF4Q8WWF5 429 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 PPP1R3EQ9H7J1 279 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 RNF121Q9H920 327 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 MCCC2Q9HCC0 563 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 KRCC1Q9NPI7 259 aaPredicted RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 DHCR7Q9UBM7 475 aaKnown RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 DAPL1A0PJW8 107 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 CCDC85CA6NKD9 419 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 CHURC1-FNTBB4DL54 471 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 PRR23D1E9PI22 279 aaPredicted RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 PRR23D2P0DMB1 279 aaPredicted RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 MLLT3P42568 568 aaPredicted RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 GPR3P46089 330 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 FNTBP49356 437 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 LYPD4Q6UWN0 246 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 RNF113BQ8IZP6 322 aaKnown RBP13.33□□□□□ -0.28
DDX41-208ENST00000507955 ACBD7Q8N6N7 88 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 BCORP1Q8N888 145 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 FRMD6Q96NE9 622 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 ZNF559Q9BR84 538 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 OR10A5Q9H207 317 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 PRDM9Q9NQV7 894 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 MED17Q9NVC6 651 aa13.33□□□□□ -0.28
DDX41-208ENST00000507955 A0A1B0GVC2 190 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 A0A1W2PPK0 400 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 CDC14CA4D256 554 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 A6NIN4 97 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 CHP2O43745 196 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 AKAP8O43823 692 aaKnown RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 TRAPPC2P0DI81 140 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 TRAPPC2BP0DI82 140 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ACVR1BP36896 505 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 OR12D2P58182 307 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 THOC7Q6I9Y2 204 aaKnown RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 TTLL10Q6ZVT0 673 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 NOXA1Q86UR1 476 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 TMEM151BQ8IW70 566 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 PRR22Q8IZ63 422 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 TOR1AIP2Q8NFQ8 470 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 OR5M3Q8NGP4 307 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ATF6BQ99941 703 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 LMF2Q9BU23 707 aaKnown RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 NDEL1Q9GZM8 345 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 CMC2Q9NRP2 79 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 PNO1Q9NRX1 252 aaKnown RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 TMEM131Q92545 1883 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 IRGMA1A4Y4 181 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 MCIDASD6RGH6 385 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 J3QLW9 94 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 OIP5O43482 229 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 RCBTB2O95199 551 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ZNF19P17023 458 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 FGF9P31371 208 aaPredicted RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 SLC3A1Q07837 685 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ELOCQ15369 112 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ZNF613Q6PF04 617 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ARL9Q6T311 187 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 C17orf47Q8NEP4 570 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 OR52E2Q8NGJ4 325 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 OR13C5Q8NGS8 318 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 OR4C6Q8NH72 309 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ZMYND19Q96E35 227 aaPredicted RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 ERMAPQ96PL5 475 aaPredicted RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 NRSN2Q9GZP1 204 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 ZNF346Q9UL40 294 aaKnown RBP13.32□□□□□ -0.28
DDX41-208ENST00000507955 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
DDX41-208ENST00000507955 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 TRDV1A0A1B0GX56 115 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 CSTAP01040 98 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 FAM157BP0CG42 384 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 NME1P15531 152 aaKnown RBP13.31□□□□□ -0.28
DDX41-208ENST00000507955 HIST1H1CP16403 213 aaKnown RBP13.31□□□□□ -0.28
DDX41-208ENST00000507955 CD1CP29017 333 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 GABRA4P48169 554 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 EFNA3P52797 238 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 CBLN3Q6UW01 205 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 IL20RBQ6UXL0 311 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 ZPLD1Q8TCW7 415 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 TSLPQ969D9 159 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 TCTN2Q96GX1 697 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 ZMIZ1Q9ULJ6 1067 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 A0A1W2PR77 199 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 FAM86C2PA6NEL3 165 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 FAM171A2A8MVW0 826 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 SRPX2O60687 465 aaPredicted RBP13.31□□□□□ -0.28
DDX41-208ENST00000507955 AK1P00568 194 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 SRFP11831 508 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 FASLGP48023 281 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 CCR4P51679 360 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 OR1D5P58170 312 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 RPL6Q02878 288 aaKnown RBP13.31□□□□□ -0.28
DDX41-208ENST00000507955 CD226Q15762 336 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 ZNF687Q8N1G0 1237 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 Q8N402 240 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 HOXB13Q92826 284 aaPredicted RBP13.31□□□□□ -0.28
DDX41-208ENST00000507955 KIAA1143Q96AT1 154 aaPredicted RBP13.31□□□□□ -0.28
DDX41-208ENST00000507955 C4orf36Q96KX1 117 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 HSPA12BQ96MM6 686 aa13.31□□□□□ -0.28
DDX41-208ENST00000507955 RNF32Q9H0A6 362 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms