RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 HTR3AP46098 478 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 POLR2HP52434 150 aaKnown RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 SELENOWP63302 87 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 CBX1P83916 185 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 MXRA7P84157 204 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 ADORA2A-AS1P86434 159 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 NPTX1Q15818 432 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 TMEM176BQ3YBM2 270 aaPredicted RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 SPATS1Q496A3 300 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 ACSF3Q4G176 576 aaPredicted RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 CYBRD1Q53TN4 286 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 SAMD4BQ5PRF9 694 aaKnown RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 C1orf185Q5T7R7 199 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 NSUN5P2Q63ZY6 315 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 GLYATQ6IB77 296 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 WBP2NLQ6ICG8 309 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 PLXDC2Q6UX71 529 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 C16orf89Q6UX73 402 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 RPTNQ6XPR3 784 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 B3GNT6Q6ZMB0 384 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 ESPNLQ6ZVH7 1005 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 TSPYL5Q86VY4 417 aaPredicted RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 RBM45Q8IUH3 476 aaKnown RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 UBQLNLQ8IYU4 475 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 FAM26EQ8N5C1 309 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 ATP6V1C2Q8NEY4 427 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 OR6T1Q8NGN1 323 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 OR10Q1Q8NGQ4 319 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 OR10D3Q8NH80 312 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 PHF10Q8WUB8 498 aaKnown RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 RASSF5Q8WWW0 418 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 OSTF1Q92882 214 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 C3orf49Q96BT1 292 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 CCDC120Q96HB5 630 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 ZNF845Q96IR2 970 aaPredicted RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 ARL5BQ96KC2 179 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 KCTD14Q9BQ13 255 aaPredicted RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 PCDHAC1Q9H158 963 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 TMEM185BQ9H7F4 350 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 EVA1AQ9H8M9 152 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 GORASP2Q9H8Y8 452 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 CALHM2Q9HA72 323 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 CACYBPQ9HB71 228 aaKnown RBP5.13□□□□□ -1.59
USP46-206ENST00000506707 NDE1Q9NXR1 346 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 CLCF1Q9UBD9 225 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 EGFL7Q9UHF1 273 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 CAMK2AQ9UQM7 478 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 SH3GLB1Q9Y371 365 aa5.13□□□□□ -1.59
USP46-206ENST00000506707 TENM4Q6N022 2769 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 TMED7-TICAM2A0A0A6YYA0 188 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 A0A0G2JNJ9 132 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 A0A1B0GWA3 101 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 A0A1W2PNR3 127 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 TMEM72A0PK05 275 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 ZC3H12DA2A288 527 aaKnown RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 MBD3L5A6NJ08 208 aaPredicted RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 CLCA1A8K7I4 914 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 H0Y3Z8 333 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 M0R3H8 397 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 EIF1AYO14602 144 aaKnown RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 TNFSF11O14788 317 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 GSTA4O15217 222 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 SEC14L5O43304 696 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 ZNF208O43345 1280 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 CXCL13O43927 109 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 FMO6PO60774 539 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 ZG16O60844 167 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 NPIPB7O75200 414 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 AQP8O94778 261 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 RCBTB2O95199 551 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 LYPD3O95274 346 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 TGM6O95932 706 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 SERPINA1P01009 418 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 IFNA14P01570 189 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 UQCRBP14927 111 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 CCNA2P20248 432 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 TNFRSF1BP20333 461 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 ME2P23368 584 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 FKBP2P26885 142 aaKnown RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 CEACAM8P31997 349 aaPredicted RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 SFTPDP35247 375 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 EIF1AXP47813 144 aaKnown RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 OR1E2P47887 323 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 CLK1P49759 484 aaKnown RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 MAP2K6P52564 334 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 CARD18P57730 90 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 NUP107P57740 925 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 RGS8P57771 180 aaPredicted RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 COPZ1P61923 177 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 MS4A2Q01362 244 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 BNIP2Q12982 314 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 SELENBP1Q13228 472 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 SF3B4Q15427 424 aaKnown RBP eCLIP5.12□□□□□ -1.59
USP46-206ENST00000506707 CDSNQ15517 529 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 OR1Q1Q15612 314 aa5.12□□□□□ -1.59
USP46-206ENST00000506707 LRRC23Q53EV4 343 aaPredicted RBP5.12□□□□□ -1.59
USP46-206ENST00000506707 SYT14P1Q58G82 188 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms