RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SLC16A11Q8NCK7 471 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 OR9A1PQ8NGU1 263 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 SYNPRQ8TBG9 265 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 FANK1Q8TC84 345 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 HGDQ93099 445 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 SLC41A3Q96GZ6 507 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 FOXN4Q96NZ1 517 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TIMP4Q99727 224 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 EFCAB11Q9BUY7 163 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 NKX6-2Q9C056 277 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 IFT22Q9H7X7 185 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 A4GALTQ9NPC4 353 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 MED11Q9P086 117 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ZMAT5Q9UDW3 170 aaKnown RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 FBXO4Q9UKT5 387 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ZMIZ1Q9ULJ6 1067 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 PRELID3BQ9Y3B1 194 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 HCFC2Q9Y5Z7 792 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF705EA8MWA4 302 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ERI3O43414 337 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SOCS5O75159 536 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 AKR7A3O95154 331 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FARS2O95363 451 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PCCBP05166 539 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ZGLP1P0C6A0 271 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 VSIG10L2P0DP72 767 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PVALBP20472 110 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 MAKP20794 623 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 HOXD10P28358 340 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 IFNGR2P38484 337 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PNLIPRP1P54315 467 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 EFNB1P98172 346 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FGL1Q08830 312 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 RBM39Q14498 530 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 OR7A5Q15622 319 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SWI5Q1ZZU3 235 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PCGF3Q3KNV8 242 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FAM26DQ5JW98 314 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 KHDRBS2Q5VWX1 349 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FRRS1Q6ZNA5 592 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FAM83HQ6ZRV2 1179 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 C17orf64Q86WR6 236 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FAM129CQ86XR2 697 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 CBARPQ8N350 705 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FAM98AQ8NCA5 519 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 C2orf15Q8WU43 125 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 OSTF1Q92882 214 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 GLYATL1Q969I3 302 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PAWRQ96IZ0 340 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 TEAD3Q99594 435 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PDCD10Q9BUL8 212 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ULBP3Q9BZM4 244 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SLC6A15Q9H2J7 730 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ASB4Q9Y574 426 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 A0A0G2JPF8 293 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ARRDC5A6NEK1 342 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 HNRNPCL3B7ZW38 293 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 AIPO00170 330 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SGCEO43556 437 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PTP4A3O75365 173 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ECDO95905 644 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 TBX6O95947 436 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 HNRNPCL4P0DMR1 293 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 GABRA1P14867 456 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 NFYBP25208 207 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 MAT2AP31153 395 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 RPL3P39023 403 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 CTAG1AP78358 180 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 HTRA3P83110 453 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 METTL11BQ5VVY1 283 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF660Q6AZW8 331 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 MRM1Q6IN84 353 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FIGNL1Q6PIW4 674 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 RBMS3Q6XE24 437 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF620Q6ZNG0 422 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 MEPCEQ7L2J0 689 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 TMPRSS9Q7Z410 1059 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 LRRTM1Q86UE6 522 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 CMIPQ8IY22 773 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 OR52L1Q8NGH7 329 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 OR52E2Q8NGJ4 325 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SCARB1Q8WTV0 552 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FCAMRQ8WWV6 532 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 AMDHD1Q96NU7 426 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SPSB2Q99619 263 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SPATA5L1Q9BVQ7 753 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 IL21RQ9HBE5 538 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ASB6Q9NWX5 421 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 AHSPQ9NZD4 102 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 KIF25Q9UIL4 384 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FARSAQ9Y285 508 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 NDUFS6O75380 124 aaKnown RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 KRT33AO76009 404 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SOD2P04179 222 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 CDK2P24941 298 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 MST1P26927 711 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 TGIF1Q15583 401 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 NDUFAF6Q330K2 333 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 SLC22A10Q63ZE4 541 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 NIPAL3Q6P499 406 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms