RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 IL11P20809 199 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 PTNP21246 168 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 DNAJA1P31689 397 aaKnown RBP18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 B3GALT5-AS1P59052 145 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 INAQ16352 499 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 PODNL1Q6PEZ8 512 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF426Q9BUY5 554 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 A0A087WUU8 490 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF17P17021 662 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 LSM11P83369 360 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 LAPTM4AQ15012 233 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 SEC23BQ15437 767 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 TBPL2Q6SJ96 375 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 ICA1LQ8NDH6 482 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 TSPAN10Q9H1Z9 355 aaPredicted RBP18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 CHRNA9Q9UGM1 479 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMCC3Q9ULS5 477 aa18.44■□□□□ 0.54
CDC42SE2-206ENST00000503291 MED12Q93074 2177 aa18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 ALDH6A1Q02252 535 aaKnown RBP18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 P3H2Q8IVL5 708 aa18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 ATP6V1C2Q8NEY4 427 aa18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMEM239Q8WW34 195 aa18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 ACOT11Q8WXI4 607 aaPredicted RBP18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 HS6ST2Q96MM7 605 aa18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 BARD1Q99728 777 aaKnown RBP18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 SERINC1Q9NRX5 453 aa18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF337Q9Y3M9 751 aa18.43■□□□□ 0.54
CDC42SE2-206ENST00000503291 BSNQ9UPA5 3926 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMEM72A0PK05 275 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 SUSD5O60279 629 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 FPR1P21462 350 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 GFRA1P56159 465 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 CMPK2Q5EBM0 449 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 TTC33Q6PID6 262 aaPredicted RBP18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF730Q6ZMV8 503 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 SFXN2Q96NB2 322 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 SLC6A15Q9H2J7 730 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 SLC6A5Q9Y345 797 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 MAGED1Q9Y5V3 778 aaPredicted RBP18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 IGKV1D-42A0A075B6H8 117 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 SH3PXD2BA1X283 911 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 PEPDP12955 493 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF23P17027 643 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 RBM34P42696 430 aaKnown RBP18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 ARHGDIAP52565 204 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 EGR4Q05215 589 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 SLC34A1Q06495 639 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 GK3PQ14409 553 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 MICAQ29983 383 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 SHQ1Q6PI26 577 aaKnown RBP18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 RRM2BQ7LG56 351 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 HS3ST5Q8IZT8 346 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 RELTQ969Z4 430 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMEM185BQ9H7F4 350 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 OAZ3Q9UMX2 235 aa18.42■□□□□ 0.54
CDC42SE2-206ENST00000503291 CACNA1BQ00975 2339 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZC3H12DA2A288 527 aaKnown RBP18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 G3V2T6 193 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 WISP2O76076 250 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 CRYABP02511 175 aaKnown RBP18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 ELK4P28324 431 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 MAP2K6P52564 334 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 UGT2B15P54855 530 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 KLRB1Q12918 225 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 C3orf33Q6P1S2 294 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZDHHC13Q8IUH4 622 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 OR4K5Q8NGD3 323 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 OR5K1Q8NHB7 308 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 WBP1Q96G27 269 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 TMEM43Q9BTV4 400 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 LDAHQ9H6V9 325 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 MEPEQ9NQ76 525 aaPredicted RBP18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 PDP1Q9P0J1 537 aaPredicted RBP18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 LIPGQ9Y5X9 500 aa18.41■□□□□ 0.54
CDC42SE2-206ENST00000503291 SAC3D1A6NKF1 404 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 A8MVM7 634 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 NPIPA5E9PKD4 350 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 H3BML4 177 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 KPNA4O00629 521 aaPredicted RBP18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF208O43345 1280 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 OPN1LWP04000 364 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 PRKACGP22612 351 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 SELENBP1Q13228 472 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 FBXW10Q5XX13 1052 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 MBOAT2Q6ZWT7 520 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 SIAH3Q8IW03 269 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 NRMQ8IXM6 262 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 RNF113BQ8IZP6 322 aaKnown RBP18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 CISD2Q8N5K1 135 aaKnown RBP18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 NRBF2Q96F24 287 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 OR11A1Q9GZK7 315 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 NPIPA1Q9UND3 350 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 MED31Q9Y3C7 131 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 ZNF407Q9C0G0 2248 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 ATRXP46100 2492 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 OR10H3O60404 316 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 CCNB2O95067 398 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 CHMP24386 653 aa18.4■□□□□ 0.54
CDC42SE2-206ENST00000503291 RAC1P63000 192 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms