RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 OR52B2Q96RD2 323 aa14.39□□□□□ -0.11
SCLT1-204ENST00000503215 FANCFQ9NPI8 374 aa14.39□□□□□ -0.11
SCLT1-204ENST00000503215 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.39□□□□□ -0.11
SCLT1-204ENST00000503215 CHRNA9Q9UGM1 479 aa14.39□□□□□ -0.11
SCLT1-204ENST00000503215 TLN2Q9Y4G6 2542 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 AGAP5A6NIR3 686 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 ERLIN1O75477 346 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 LY6G6DO95868 133 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 IGHV3-9P01782 118 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 IGHV1-2P23083 117 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 APOBEC1P41238 236 aaKnown RBP14.38□□□□□ -0.11
SCLT1-204ENST00000503215 MVDP53602 400 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 NR1H2P55055 460 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 ITGADQ13349 1161 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 CAPRIN1Q14444 709 aaKnown RBP14.38□□□□□ -0.11
SCLT1-204ENST00000503215 P2RY6Q15077 328 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 GTDC1Q4AE62 458 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 Q6ZT83 130 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 BHLHA15Q7RTS1 189 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-204ENST00000503215 CROCCP2Q86T23 111 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 MTDHQ86UE4 582 aaKnown RBP14.38□□□□□ -0.11
SCLT1-204ENST00000503215 ARFGAP2Q8N6H7 521 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 ARL8AQ96BM9 186 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 MANSC1Q9H8J5 431 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 TMBIM4Q9HC24 238 aa14.38□□□□□ -0.11
SCLT1-204ENST00000503215 DPRXA6NFQ7 191 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 ERICH4A6NGS2 130 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 TRPC5OSA6NMA1 111 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 ZNF716A6NP11 495 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 ZNF724A8MTY0 619 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 SMAD7O15105 426 aaKnown RBP14.37□□□□□ -0.11
SCLT1-204ENST00000503215 CLOCKO15516 846 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 RPS4Y1P22090 263 aaKnown RBP14.37□□□□□ -0.11
SCLT1-204ENST00000503215 ZSCAN26Q16670 478 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 BEND6Q5SZJ8 279 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-204ENST00000503215 NCMAPQ5T1S8 102 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 ABLIM2Q6H8Q1 611 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 PRSS57Q6UWY2 283 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 CLEC9AQ6UXN8 241 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 LRRC74BQ6ZQY2 392 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 GRINAQ7Z429 371 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 OR9I1Q8NGQ6 314 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 HSD17B8Q92506 261 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 MAELQ96JY0 434 aaKnown RBP14.37□□□□□ -0.11
SCLT1-204ENST00000503215 COX4I2Q96KJ9 171 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 TACO1Q9BSH4 297 aaKnown RBP14.37□□□□□ -0.11
SCLT1-204ENST00000503215 GSX2Q9BZM3 304 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 EXOSC3Q9NQT5 275 aaKnown RBP14.37□□□□□ -0.11
SCLT1-204ENST00000503215 RLIMQ9NVW2 624 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 OSGIN1Q9UJX0 560 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 ZANQ9Y493 2812 aa14.37□□□□□ -0.11
SCLT1-204ENST00000503215 IGKV3D-15A0A087WSY6 115 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 TMED7-TICAM2A0A0A6YYA0 188 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 TMEM72A0PK05 275 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 ZC3H12DA2A288 527 aaKnown RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 RFXANKO14593 260 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 SLC22A3O75751 556 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 SOD3P08294 240 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 NR2F1P10589 423 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 ETFAP13804 333 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 FOXG1P55316 489 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 OR2B6P58173 313 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 CSNK2A1P68400 391 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 HPCAP84074 193 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 STK11Q15831 433 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 KRTAP21-3Q3LHN1 58 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 PDCD4Q53EL6 469 aaKnown RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 MRPL2Q5T653 305 aaKnown RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 GALNT5Q7Z7M9 940 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 ZNF100Q8IYN0 542 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 ZNF611Q8N823 705 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 PIWIL2Q8TC59 973 aaKnown RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 SLC25A43Q8WUT9 341 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 OIT3Q8WWZ8 545 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 AURKBQ96GD4 344 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 ZBTB18Q99592 522 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 MTHFD2LQ9H903 347 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 ZNF701Q9NV72 531 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-204ENST00000503215 LAMP3Q9UQV4 416 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 LIPT1Q9Y234 373 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 TMED7Q9Y3B3 224 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 RNF115Q9Y4L5 304 aa14.36□□□□□ -0.11
SCLT1-204ENST00000503215 PMS2P2O95744 297 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 GKN3PP0CG01 181 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 IMPDH2P12268 514 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 TACR3P29371 465 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 SLC18A1P54219 525 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 BSPH1Q075Z2 132 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 ATG16L1Q676U5 607 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 VRK2Q86Y07 508 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 TRIML2Q8N7C3 387 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 KBTBD8Q8NFY9 601 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 TMEM171Q8WVE6 324 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 VPS33AQ96AX1 596 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 FAM107BQ9H098 131 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 NKIRAS1Q9NYS0 192 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 NPAP1Q9NZP6 1156 aa14.35□□□□□ -0.11
SCLT1-204ENST00000503215 NSD1Q96L73 2696 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-204ENST00000503215 CNOT4O95628 575 aaKnown RBP14.34□□□□□ -0.11
SCLT1-204ENST00000503215 CD3EP07766 207 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms