RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GNB4Q9HAV0 340 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 PNO1Q9NRX1 252 aaKnown RBP4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 DHRS4-AS1Q9P1J3 65 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 MDFICQ9P1T7 246 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ARMCX1Q9P291 453 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ONECUT1Q9UBC0 465 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 USP16Q9Y5T5 823 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 STYXL1Q9Y6J8 313 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ADGRB1O14514 1584 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ADGRB2O60241 1585 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 ITSN1Q15811 1721 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 NRAPQ86VF7 1730 aa4.18□□□□□ -1.74
HMGB1P3-201ENST00000502802 RPAP1Q9BWH6 1393 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 DLC1Q96QB1 1528 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 A0A0J9YWU9 116 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 A0A1W2PPR1 153 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF716A6NP11 495 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 EFCAB7A8K855 629 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 E9PLD3 99 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 FOXE1O00358 373 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 SAP18O00422 153 aaKnown RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 MED7O43513 233 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 ERLIN1O75477 346 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 RHBDL1O75783 438 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 VENTXO95231 258 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 GJB5O95377 273 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC2A10O95528 541 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 PGK1P00558 417 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 HOXD4P09016 255 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 UQCRFS1P1P0C7P4 283 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF735P0CB33 412 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 LAMP1P11279 417 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 CYP2B6P20813 491 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 PTBP1P26599 531 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 ELK3P41970 407 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 CDH4P55283 916 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 OC90Q02509 493 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 BST1Q10588 318 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 SSX2Q16385 188 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 PDZK1Q5T2W1 519 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 PAQR6Q6TCH4 344 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 METTL7BQ6UX53 244 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF600Q6ZNG1 722 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 GPRIN3Q6ZVF9 776 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC47A2Q86VL8 602 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 MCOLN2Q8IZK6 566 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 MFSD9Q8NBP5 474 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 C17orf47Q8NEP4 570 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 MAIP1Q8WWC4 291 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 CNOT6LQ96LI5 555 aaKnown RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF599Q96NL3 588 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 MCCC1Q96RQ3 725 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 COPS8Q99627 209 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 SPATA16Q9BXB7 569 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 ROPN1BQ9BZX4 212 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 RHBGQ9H310 441 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 POLE4Q9NR33 117 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 SUN2Q9UH99 717 aa4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 AK6Q9Y3D8 172 aaKnown RBP4.17□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLIT2O94813 1529 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 DHX57Q6P158 1386 aaKnown RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 TRAV9-2A0A087WT02 112 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 GOLGA8OA6NCC3 632 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 PP2D1A8MPX8 630 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 FAM220BPB1ANY3 271 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 F5H6K3 240 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 GOLGA8NF8WBI6 632 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 SH3BGRLO75368 114 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 NOL4O94818 638 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 KBTBD11O94819 623 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 PIGRP01833 764 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 CCDC130P13994 396 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 CD80P33681 288 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 RPL13AP40429 203 aaKnown RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 SSR1P43307 286 aaKnown RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 TDO2P48775 406 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 LIM2P55344 173 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 KLRC3Q07444 240 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 IMMTQ16891 758 aaKnown RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 OTUD3Q5T2D3 398 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 PRAMEF5Q5TYX0 476 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 PRAMEF6Q5VXH4 476 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF497Q6ZNH5 498 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC25A42Q86VD7 318 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 FAM228AQ86W67 206 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 HIPK1Q86Z02 1210 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC35F2Q8IXU6 374 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 MTURNQ8N3F0 131 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 FGFRL1Q8N441 504 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 TRPV1Q8NER1 839 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR9K2Q8NGE7 335 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR4D9Q8NGE8 314 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 OR52K2Q8NGK3 314 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 VN1R17PQ8TDU5 208 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 EFHD2Q96C19 240 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 ZNF689Q96CS4 500 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 C10orf35Q96D05 121 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 RASD2Q96D21 266 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 TCEANC2Q96MN5 208 aa4.16□□□□□ -1.74
HMGB1P3-201ENST00000502802 SLC38A2Q96QD8 506 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms