RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ECSITQ9BQ95 431 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 SLC38A1Q9H2H9 487 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 KAT8Q9H7Z6 458 aaKnown RBP13.72□□□□□ -0.21
NUP50-219ENST00000497960 SERINC1Q9NRX5 453 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.72□□□□□ -0.21
NUP50-219ENST00000497960 NDE1Q9NXR1 346 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 CLEC4AQ9UMR7 237 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 ANGPT4Q9Y264 503 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 TACC2O95359 2948 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 F8P00451 2351 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 C16orf97H3BN30 126 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 ETV2O00321 342 aaPredicted RBP13.71□□□□□ -0.21
NUP50-219ENST00000497960 EFNA2O43921 213 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 DNAJA2O60884 412 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 SS18L1O75177 396 aaPredicted RBP13.71□□□□□ -0.21
NUP50-219ENST00000497960 UBOX5O94941 541 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 NTN1O95631 604 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 SLC6A2P23975 617 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 DNAJA1P31689 397 aaKnown RBP13.71□□□□□ -0.21
NUP50-219ENST00000497960 PGM1P36871 562 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 SLC7A2P52569 658 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 SESN3P58005 492 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 PSME3P61289 254 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 KCNJ10P78508 379 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 C16orf89Q6UX73 402 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 SERPINA11Q86U17 422 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 CDC20BQ86Y33 519 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 ZNF610Q8N9Z0 462 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 C11orf65Q8NCR3 313 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 ZNF563Q8TA94 476 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 BBS10Q8TAM1 723 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 SLC38A5Q8WUX1 472 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 ROBO4Q8WZ75 1007 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 NRGNQ92686 78 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 PIF1Q9H611 641 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 TMEM38AQ9H6F2 299 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 FANCFQ9NPI8 374 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 AP3M1Q9Y2T2 418 aa13.71□□□□□ -0.21
NUP50-219ENST00000497960 CSMD1Q96PZ7 3565 aa13.71□□□□□ -0.22
NUP50-219ENST00000497960 FAM220BPB1ANY3 271 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 TFPTP0C1Z6 253 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 UGT2B10P36537 528 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 CDK6Q00534 326 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 RBBP4Q09028 425 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 MERTKQ12866 999 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
NUP50-219ENST00000497960 ZNF239Q16600 458 aaKnown RBP13.7□□□□□ -0.22
NUP50-219ENST00000497960 EXOC3L2Q2M3D2 409 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 C3orf33Q6P1S2 294 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
NUP50-219ENST00000497960 HMGN2P46Q86SG4 172 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 CMIPQ8IY22 773 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 PGAM4Q8N0Y7 254 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 HIPK4Q8NE63 616 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 FAM71CQ8NEG0 241 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 WDR60Q8WVS4 1066 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 PMM1Q92871 262 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 NINJ1Q92982 152 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 MED18Q9BUE0 208 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 SRXN1Q9BYN0 137 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 QRSL1Q9H0R6 528 aaKnown RBP13.7□□□□□ -0.22
NUP50-219ENST00000497960 MTHFD2LQ9H903 347 aaPredicted RBP13.7□□□□□ -0.22
NUP50-219ENST00000497960 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 PLSCR4Q9NRQ2 329 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 ACER3Q9NUN7 267 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 TESMINQ9Y4I5 508 aa13.7□□□□□ -0.22
NUP50-219ENST00000497960 DSPPQ9NZW4 1301 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 CCT8L1PA6NM43 557 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 RYKP34925 604 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 PCGF2P35227 344 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 RAC3P60763 192 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 SLC25A3Q00325 362 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 MAPK11Q15759 364 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 TMEM201Q5SNT2 666 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 PRAMEF8Q5VWM4 474 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 PRAMEF7Q5VXH5 474 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 REEP3Q6NUK4 255 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 C8orf82Q6P1X6 216 aaPredicted RBP13.69□□□□□ -0.22
NUP50-219ENST00000497960 ERICH5Q6P6B1 374 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 FCRLAQ7L513 359 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 PTOV1Q86YD1 416 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 SLC30A8Q8IWU4 369 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 PEX5LQ8IYB4 626 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 RNF128Q8TEB7 428 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 ABHD3Q8WU67 409 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 ZNF524Q96C55 264 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 WFIKKN1Q96NZ8 548 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 KLHL4Q9C0H6 718 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 COQ10BQ9H8M1 238 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 EXOSC3Q9NQT5 275 aaKnown RBP13.69□□□□□ -0.22
NUP50-219ENST00000497960 CMTM6Q9NX76 183 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 ADA2Q9NZK5 511 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 ST6GALNAC2Q9UJ37 374 aa13.69□□□□□ -0.22
NUP50-219ENST00000497960 SPIN1Q9Y657 262 aaPredicted RBP13.69□□□□□ -0.22
NUP50-219ENST00000497960 A0A0G2JPF8 293 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms