RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZNF208O43345 1280 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 ADAM11O75078 769 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 THBDP07204 575 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 THBS1P07996 1170 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 FPR1P21462 350 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 CRATP43155 626 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 OR3A2P47893 321 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 POLR2HP52434 150 aaKnown RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 DSTNP60981 165 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 RASGEF1BQ0VAM2 473 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 FADDQ13158 208 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 PDK3Q15120 406 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 NUFIP2Q7Z417 695 aaKnown RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 CXorf67Q86X51 503 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 PIGXQ8TBF5 258 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 DYDC1Q8WWB3 177 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 STON2Q8WXE9 905 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 CNOT9Q92600 299 aaKnown RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 KISS1RQ969F8 398 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 VPS33AQ96AX1 596 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 PIP5K1AQ99755 562 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 CCDC28BQ9BUN5 200 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 TMUB1Q9BVT8 246 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 POTEKPQ9BYX7 375 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 RAD21L1Q9H4I0 556 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 VIPAS39Q9H9C1 493 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 CACYBPQ9HB71 228 aaKnown RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 SLCO1B3Q9NPD5 702 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 TMEM45AQ9NWC5 275 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 NIPBLQ6KC79 2804 aaeCLIP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 PLCE1Q9P212 2302 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 CDHR4A6H8M9 788 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 BCHEP06276 602 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 TFPIP10646 304 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 ETFAP13804 333 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 IL32P24001 234 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 SLC1A3P43003 542 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 IDH2P48735 452 aaKnown RBP13.96□□□□□ -0.17
HDAC4-213ENST00000496347 EPS8Q12929 822 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 MAPK11Q15759 364 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 PRAMEF8Q5VWM4 474 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 PRAMEF7Q5VXH5 474 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 ANKRD34AQ69YU3 496 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 Q6ZT83 130 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 C22orf34Q6ZV56 151 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 SSX8Q7RTT4 187 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 HDXQ7Z353 690 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 GALNT5Q7Z7M9 940 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 MTDHQ86UE4 582 aaKnown RBP13.96□□□□□ -0.17
HDAC4-213ENST00000496347 SLC38A5Q8WUX1 472 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 GTF2H4Q92759 462 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 PIGTQ969N2 578 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 S100PBPQ96BU1 408 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 AURKBQ96GD4 344 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-213ENST00000496347 UBTD1Q9HAC8 227 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 CADP27708 2225 aa13.96□□□□□ -0.17
HDAC4-213ENST00000496347 NAV3Q8IVL0 2385 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 A0A096LPI6 279 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 AP3D1O14617 1153 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 TFPTP0C1Z6 253 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 BMP2P12643 396 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 CD99P14209 185 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 HOXB9P17482 250 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-213ENST00000496347 KLK2P20151 261 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 COX5AP20674 150 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 IDH3AP50213 366 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 SLC16A1P53985 500 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 ITGADQ13349 1161 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 LARS2Q15031 903 aaKnown RBP13.95□□□□□ -0.18
HDAC4-213ENST00000496347 ACKR1Q16570 336 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 GTDC1Q4AE62 458 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 SFRP5Q5T4F7 317 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF836Q6ZNA1 936 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 OR52P1PQ8NH57 321 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 DDIT4LQ96D03 193 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF300Q96RE9 604 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-213ENST00000496347 CCL19Q99731 98 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 PAIP1Q9H074 479 aaKnown RBP13.95□□□□□ -0.18
HDAC4-213ENST00000496347 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 A4GALTQ9NPC4 353 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 OSGIN1Q9UJX0 560 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 TRAPPC4Q9Y296 219 aa13.95□□□□□ -0.18
HDAC4-213ENST00000496347 ZNF443Q9Y2A4 671 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-213ENST00000496347 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 TMED7-TICAM2A0A0A6YYA0 188 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 NR5A2O00482 541 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 GPR171O14626 319 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 KLF4O43474 513 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 EIF1BO60739 113 aaKnown RBP13.94□□□□□ -0.18
HDAC4-213ENST00000496347 H2AFXP16104 143 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-213ENST00000496347 TACR3P29371 465 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 ATP4BP51164 291 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 AQP5P55064 265 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 ADAM8P78325 824 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 FOXD4Q12950 439 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-213ENST00000496347 RGNQ15493 299 aa13.94□□□□□ -0.18
HDAC4-213ENST00000496347 LRIF1Q5T3J3 769 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms