RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 FLRT2O43155 660 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 SIX6O95475 246 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 HIST1H2ABP04908 130 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 THEGLP0DJG4 465 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 ARSBP15848 533 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 HIST1H1CP16403 213 aaKnown RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 CCDC80Q76M96 950 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 HIST3H2AQ7L7L0 130 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 HIST1H2ACQ93077 130 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 UPRTQ96BW1 309 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 MAP3K3Q99759 626 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 SFXN1Q9H9B4 322 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 FKBP14Q9NWM8 211 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 FBXL3Q9UKT7 428 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 IGHV3-20A0A0C4DH32 117 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 ZSCAN5BA6NJL1 495 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 RFPL3O75679 317 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 TFPIP10646 304 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 MEPCEQ7L2J0 689 aaKnown RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 FCRLAQ7L513 359 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 NDUFAF7Q7L592 441 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 OR4C3Q8NH37 302 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 ST6GAL2Q96JF0 529 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 DGAT2Q96PD7 388 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 CTRCQ99895 268 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 MOV10Q9HCE1 1003 aaKnown RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 TCF7L1Q9HCS4 588 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 MKKSQ9NPJ1 570 aaPredicted RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 WASH6PQ9NQA3 447 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 CBLCQ9ULV8 474 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 FNDC1Q4ZHG4 1894 aaPredicted RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 HTR2AP28223 471 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 GRK6P43250 576 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 GDI2P50395 445 aaKnown RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 GBX2P52951 348 aaPredicted RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 MAB21L1Q13394 359 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 UBXN2BQ14CS0 331 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 RASSF6Q6ZTQ3 369 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 KIAA1958Q8N8K9 716 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 OR2T35Q8NGX2 323 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 ABHD4Q8TB40 342 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 DIO2Q92813 273 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 RAB11FIP5Q9BXF6 653 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 KCNK15Q9H427 330 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 PHF11Q9UIL8 331 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 ING4Q9UNL4 249 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 FARSAQ9Y285 508 aaKnown RBP12.44□□□□□ -0.42
GPC1-209ENST00000495100 AP1M2Q9Y6Q5 423 aa12.44□□□□□ -0.42
GPC1-209ENST00000495100 H0YC42 278 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 OMPP47874 163 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 TNFRSF17Q02223 184 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 GPR176Q14439 515 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 MBOAT2Q6ZWT7 520 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 OR2B2Q9GZK3 357 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 TMEM5Q9Y2B1 443 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 DTX4Q9Y2E6 619 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 DOCK7Q96N67 2140 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 FZD7O75084 574 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 CPEP16870 476 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 CTXN1P60606 82 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 RPS15AP62244 130 aaKnown RBP12.43□□□□□ -0.42
GPC1-209ENST00000495100 C3orf38Q5JPI3 329 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 LILRB4Q8NHJ6 448 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 LGALS14Q8TCE9 139 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 HSD17B8Q92506 261 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 ARHGAP9Q9BRR9 750 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 CLEC4MQ9H2X3 399 aaPredicted RBP12.43□□□□□ -0.42
GPC1-209ENST00000495100 POT1Q9NUX5 634 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 SPTA1P02549 2419 aa12.43□□□□□ -0.42
GPC1-209ENST00000495100 ANXA2P2A6NMY6 339 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 EFEMP2O95967 443 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 THY1P04216 161 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ANXA2P07355 339 aaKnown RBP12.42□□□□□ -0.42
GPC1-209ENST00000495100 LSSP48449 732 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 FNTBP49356 437 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 EIPR1Q53HC9 387 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ZNF627Q7L945 461 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 SIAH3Q8IW03 269 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ZNF619Q8N2I2 560 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 GDPD1Q8N9F7 314 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 GAL3ST3Q96A11 431 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 SLC22A18Q96BI1 424 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 TOE1Q96GM8 510 aaKnown RBP12.42□□□□□ -0.42
GPC1-209ENST00000495100 SENP5Q96HI0 755 aaPredicted RBP12.42□□□□□ -0.42
GPC1-209ENST00000495100 PSD2Q9BQI7 771 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 C1QTNF2Q9BXJ5 285 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 YBX2Q9Y2T7 364 aaKnown RBP12.42□□□□□ -0.42
GPC1-209ENST00000495100 SLCO1B1Q9Y6L6 691 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 MCIDASD6RGH6 385 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 STAT5AP42229 794 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 RPS5P46782 204 aaKnown RBP12.42□□□□□ -0.42
GPC1-209ENST00000495100 CDK5Q00535 292 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 GPR50Q13585 617 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 FAM53BQ14153 422 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 OCLNQ16625 522 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms