RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 A0A1B0GWJ7 208 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 XPO1O14980 1071 aaKnown RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 IDH1O75874 414 aaKnown RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 MFN2O95140 757 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 OPN1LWP04000 364 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 UGT2B4P06133 528 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 RPA2P15927 270 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 HNRNPA2B1P22626 353 aaKnown RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 HTR2AP28223 471 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 HPCAL1P37235 193 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 ACADVLP49748 655 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 DIO3P55073 304 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 LAGE3Q14657 143 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 KIAA0040Q15053 153 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 TPD52L1Q16890 204 aaPredicted RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 SLC36A3Q495N2 470 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 FHL5Q5TD97 284 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 ATL3Q6DD88 541 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 ZNF544Q6NX49 715 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 FRA10AC1Q70Z53 315 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 MOB1BQ7L9L4 216 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 GPR137CQ8N3F9 429 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 OR10H4Q8NGA5 316 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 OR5L2Q8NGL0 311 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 IL1F10Q8WWZ1 152 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 MARC2Q969Z3 335 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 HAVCR1Q96D42 359 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 KIR2DL4Q99706 377 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 GPA33Q99795 319 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 ERP44Q9BS26 406 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 YTHDF1Q9BYJ9 559 aaKnown RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 CHIAQ9BZP6 476 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 RAB33BQ9H082 229 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 SPRR3Q9UBC9 169 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 APOBEC3BQ9UH17 382 aaKnown RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 RIMS3Q9UJD0 308 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 ABCG2Q9UNQ0 655 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 OR10H1Q9Y4A9 318 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 ALG6Q9Y672 507 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 RGPD5Q99666 1765 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 POLR3AO14802 1390 aaPredicted RBP3.22□□□□□ -1.89
SMC4-224ENST00000494612 ADCY9O60503 1353 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 COL24A1Q17RW2 1714 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 WDR90Q96KV7 1748 aa3.22□□□□□ -1.89
SMC4-224ENST00000494612 TUBGCP6Q96RT7 1819 aa3.21□□□□□ -1.89
SMC4-224ENST00000494612 PIK3C2AO00443 1686 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 CPSF1Q10570 1443 aaKnown RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 PPIP5K1Q6PFW1 1433 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 SLIT3O75094 1523 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 ABCC6O95255 1503 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 GSAPA4D1B5 854 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 PPIAL4DF5H284 164 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 WWP2O00308 870 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 NDC80O14777 642 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 ZSCAN12O43309 604 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 BCAS1O75363 584 aaPredicted RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 P0C879 139 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 GCKP35557 465 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 RBMXP38159 391 aaKnown RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 RGS4P49798 205 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 MXD4Q14582 209 aaPredicted RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 PDK4Q16654 411 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 SLC5A12Q1EHB4 618 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 C9orf129Q5T035 196 aaKnown RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 OR5M10Q6IEU7 315 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 MTURNQ8N3F0 131 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 TEX9Q8N6V9 391 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 STXBP6Q8NFX7 210 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 OR2A12Q8NGT7 310 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 RAET1EQ8TD07 263 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 AENQ8WTP8 325 aaKnown RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 CELF6Q96J87 481 aaKnown RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 C12orf66Q96MD2 445 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 NAP1L5Q96NT1 182 aaPredicted RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 SLC30A2Q9BRI3 323 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 EDEM2Q9BV94 578 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 DUSP16Q9BY84 665 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 NMUR2Q9GZQ4 415 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 Q9H3A6 140 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 PTGES2Q9H7Z7 377 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 VNN3Q9NY84 501 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 OR1A1Q9P1Q5 309 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 SAMD4AQ9UPU9 718 aaKnown RBP3.21□□□□□ -1.9
SMC4-224ENST00000494612 PDE10AQ9Y233 779 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 MAD1L1Q9Y6D9 718 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 TRPM1Q7Z4N2 1603 aa3.21□□□□□ -1.9
SMC4-224ENST00000494612 QRICH2Q9H0J4 1663 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 COL18A1P39060 1754 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 LOC100131303A0A0U1RQF7 123 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 SMIM28A0A1B0GU29 152 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 TUBAL3A6NHL2 446 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 ZFP92A6NM28 416 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 E7ENQ6 273 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 LRATO95237 230 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 LY6G6DO95868 133 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 PDHBP11177 359 aa3.2□□□□□ -1.9
SMC4-224ENST00000494612 CPN1P15169 458 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms