RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PRTFDC1Q9NRG1 225 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 CMTM6Q9NX76 183 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 WWOXQ9NZC7 414 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ERVK-18Q9QC07 812 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ADGRE2Q9UHX3 823 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 FBXW2Q9UKT8 454 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 SNX6Q9UNH7 406 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 ACOT9Q9Y305 439 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 U3KQ87 197 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 HCFC1P51610 2035 aa7.5□□□□□ -1.21
HDAC6-234ENST00000493923 HRNRQ86YZ3 2850 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PHF3Q92576 2039 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 A0A1W2PP18 115 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 A0A1W2PS29 197 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 B4DXG7 233 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 F8W036 122 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 HRKO00198 91 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 LDB3O75112 727 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 SLC43A1O75387 559 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ERN1O75460 977 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 EEDO75530 441 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ITGA10O75578 1167 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 CLEC3AO75596 197 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 STK16O75716 305 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 RAF1P04049 648 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 IFNA4P05014 189 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 IFI30P13284 250 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 MTHFD2P13995 350 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 BTF3P20290 206 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 CHMP24386 653 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 NUP62P37198 522 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 RFX2P48378 723 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ALDH9A1P49189 494 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 HNMTP50135 292 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 TAS2R50P59544 299 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 RRAS2P62070 204 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 BTG1P62324 171 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 HSF2Q03933 536 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PCDH1Q08174 1060 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 DBPQ10586 325 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 CHIT1Q13231 466 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 LAPTM5Q13571 262 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 RPS6KA2Q15349 733 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 BAK1Q16611 211 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF630Q2M218 657 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF750Q32MQ0 723 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 EMC4Q5J8M3 183 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 SLC35F1Q5T1Q4 408 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 LCN1P1Q5VSP4 162 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 GPR139Q6DWJ6 353 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 TFAP2EQ6VUC0 442 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 LARP4Q71RC2 724 aaKnown RBP eCLIP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF367Q7RTV3 350 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ISCA2Q86U28 154 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 STX12Q86Y82 276 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 P3H2Q8IVL5 708 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 OR4N5Q8IXE1 308 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PHC2Q8IXK0 858 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 CENPLQ8N0S6 344 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 LGI4Q8N135 537 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PLD6Q8N2A8 252 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF808Q8N4W9 903 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 TBC1D19Q8N5T2 526 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF540Q8NDQ6 660 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF680Q8NEM1 530 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 OR2L5Q8NG80 312 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 OR4M1Q8NGD0 313 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 OR52N2Q8NGI0 321 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 SLC9A6Q92581 669 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 KIAA1191Q96A73 305 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 ANKRD9Q96BM1 317 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 C11orf24Q96F05 449 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PPP1R36Q96LQ0 422 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 TRNT1Q96Q11 434 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 FYTTD1Q96QD9 318 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 DMRTA2Q96SC8 542 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 MS4A8Q9BY19 250 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 TRIM8Q9BZR9 551 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PITHD1Q9GZP4 211 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 NT5DC2Q9H857 520 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 GORASP2Q9H8Y8 452 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 EMC7Q9NPA0 242 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PLCXD1Q9NUJ7 323 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 MCUBQ9NWR8 336 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PPP1R14DQ9NXH3 145 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 CD274Q9NZQ7 290 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 EGFL7Q9UHF1 273 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 DAPP1Q9UN19 280 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 PPIEQ9UNP9 301 aaKnown RBP7.49□□□□□ -1.21
HDAC6-234ENST00000493923 MEMO1Q9Y316 297 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 MMACHCQ9Y4U1 282 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 LIPGQ9Y5X9 500 aa7.49□□□□□ -1.21
HDAC6-234ENST00000493923 C2CD3Q4AC94 2353 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 A0A1B0GTH9 108 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 A8MV72 311 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 FXYD1O00168 92 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 WWP2O00308 870 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 UPK1AO00322 258 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 B3GALT2O43825 422 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms