RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CHRNA6Q15825 494 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 CYP51A1Q16850 503 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 MICBQ29980 383 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 ZNF718Q3SXZ3 478 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 TIGITQ495A1 244 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 TMEM52BQ4KMG9 183 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 PIP5KL1Q5T9C9 394 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 LGSNQ5TDP6 509 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 SEL1L2Q5TEA6 688 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 AADACL4Q5VUY2 407 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 REP15Q6BDI9 236 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 EIF3MQ7L2H7 374 aaKnown RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 SSX9Q7RTT3 188 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 ERICH1Q86X53 443 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 KATNAL2Q8IYT4 538 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 METTL4Q8N3J2 472 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 KIR3DL3Q8N743 410 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 OR4D9Q8NGE8 314 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 MRPS31Q92665 395 aaKnown RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 ATXN7L3BQ96GX2 97 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 C9orf85Q96MD7 179 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 PANX1Q96RD7 426 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 IL4I1Q96RQ9 567 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 EPYCQ99645 322 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 DPH7Q9BTV6 452 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 STMN4Q9H169 189 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 RHBGQ9H310 441 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 GLIPR2Q9H4G4 154 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 SMYD3Q9H7B4 428 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 TDRD3Q9H7E2 651 aaKnown RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 NIPAL2Q9H841 368 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 MEPEQ9NQ76 525 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 EXOSC3Q9NQT5 275 aaKnown RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 SPHK2Q9NRA0 654 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 SLC7A8Q9UHI5 535 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 ATRNO75882 1429 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 DAPK1P53355 1430 aa3.66□□□□□ -1.82
GTF3A-208ENST00000493903 COL22A1Q8NFW1 1626 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-208ENST00000493903 FRMPD3Q5JV73 1810 aa3.65□□□□□ -1.82
GTF3A-208ENST00000493903 NALCNQ8IZF0 1738 aa3.65□□□□□ -1.82
GTF3A-208ENST00000493903 USP6P35125 1406 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 PP2D1A8MPX8 630 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 NTN3O00634 580 aaPredicted RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 LMX1BO60663 402 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 BBOX1O75936 387 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 PATE4P0C8F1 98 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 SNHG28P0DPA3 235 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 CHMLP26374 656 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 GCAP28676 217 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 CD1CP29017 333 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 SPRP35270 261 aaPredicted RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 GNB1P62873 340 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 HNRNPA0Q13151 305 aaKnown RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 PEX6Q13608 980 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 FHL1Q13642 323 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF146Q15072 292 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 MS4A18Q3C1V0 323 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 TEX44Q53QW1 395 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 MS4A13Q5J8X5 152 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 FAM120AOSQ5T036 256 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 BSPRYQ5W0U4 402 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 FAM219BQ5XKK7 198 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 C16orf87Q6PH81 154 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 MFSD6LQ8IWD5 586 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 FGFRL1Q8N441 504 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF491Q8N8L2 437 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 OR2T6Q8NHC8 308 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 FLVCR1-AS1Q8TAF5 88 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 TAF15Q92804 592 aaKnown RBP eCLIP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 MOCOSQ96EN8 888 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 TIMD4Q96H15 378 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 SERAC1Q96JX3 654 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF578Q96N58 590 aaPredicted RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 F2RL3Q96RI0 385 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 PPDPFQ9H3Y8 114 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 EHD1Q9H4M9 534 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 NHEJ1Q9H9Q4 299 aaPredicted RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 NMRAL1Q9HBL8 299 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 POPDC2Q9HBU9 364 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 PLCXD1Q9NUJ7 323 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 FAM120CQ9NX05 1096 aaKnown RBP3.65□□□□□ -1.83
GTF3A-208ENST00000493903 BFARQ9NZS9 450 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 NTNG1Q9Y2I2 539 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 STARD10Q9Y365 291 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 CPQQ9Y646 472 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 AUP1Q9Y679 476 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 PTPN23Q9H3S7 1636 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 ADGRL2O95490 1459 aa3.65□□□□□ -1.83
GTF3A-208ENST00000493903 VPS8Q8N3P4 1428 aa3.64□□□□□ -1.83
GTF3A-208ENST00000493903 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
GTF3A-208ENST00000493903 TRAV25A0A0B4J276 109 aa3.64□□□□□ -1.83
GTF3A-208ENST00000493903 SUPT3HB4E1H0 165 aa3.64□□□□□ -1.83
GTF3A-208ENST00000493903 H3BMQ9 156 aa3.64□□□□□ -1.83
GTF3A-208ENST00000493903 M0QX08 132 aa3.64□□□□□ -1.83
GTF3A-208ENST00000493903 TRDMT1O14717 391 aaKnown RBP3.64□□□□□ -1.83
GTF3A-208ENST00000493903 CXCL13O43927 109 aa3.64□□□□□ -1.83
GTF3A-208ENST00000493903 OR2F2O95006 317 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms