RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PIPOXQ9P0Z9 390 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 IL20RAQ9UHF4 553 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TNFSF13BQ9Y275 285 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 MMP24Q9Y5R2 645 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 NPTNQ9Y639 398 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 MRPL42Q9Y6G3 142 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 A8MWP6 167 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CDRT15L2A8MXV6 281 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM238C9JI98 176 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ANHXE9PGG2 379 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 GFYI3L273 518 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 M0QYT0 321 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 GALR3O60755 368 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 HLA-DPB1P04440 258 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ADRA2AP08913 450 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 MMP7P09237 267 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CTSHP09668 335 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CCR1P32246 355 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TAGLN2P37802 199 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 OR3A1P47881 315 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CCR4P51679 360 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 RAP1AP62834 184 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SF1Q15637 639 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SLC14A2Q15849 920 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SLC27A1Q6PCB7 646 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 PRSS45Q7RTY3 260 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SZRD1Q7Z422 152 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 PIM3Q86V86 326 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 LRP11Q86VZ4 500 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 MFSD6LQ8IWD5 586 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 C7orf61Q8IZ16 206 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 BEST3Q8N1M1 668 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 OR5M3Q8NGP4 307 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 OR13C3Q8NGS6 347 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SLC41A3Q96GZ6 507 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF354BQ96LW1 612 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 PACRGQ96M98 296 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 GABARAPL3Q9BY60 117 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 DUSP15Q9H1R2 295 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SLC52A3Q9NQ40 469 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 RASD1Q9Y272 281 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 RBM7Q9Y580 266 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 GGT3PA6NGU5 568 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SYT5O00445 386 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TSPAN3O60637 253 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 OPN1SWP03999 348 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 METTL15P1P0C7V9 234 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TNFRSF1BP20333 461 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CD82P27701 267 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 PRDX3P30048 256 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CEACAM8P31997 349 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 S100A3P33764 101 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 IRS1P35568 1242 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 RBX1P62877 108 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 PITPNAQ00169 270 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 MEF2DQ14814 521 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 KHDC3LQ587J8 217 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 HECTD2Q5U5R9 776 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ABLIM2Q6H8Q1 611 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 FAHD1Q6P587 224 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 C17orf99Q6UX52 265 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 PEG10Q86TG7 708 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 POP5Q969H6 163 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 AKR1E2Q96JD6 320 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 GPR21Q99679 349 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 NRIP2Q9BQI9 281 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 NRSN2Q9GZP1 204 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TWSG1Q9GZX9 223 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 KRCC1Q9NPI7 259 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TVP23BQ9NYZ1 205 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 FBXL4Q9UKA2 621 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 DYRK1BQ9Y463 629 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 RAI2Q9Y5P3 530 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 A0A0D9SG52 128 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 FAM220BPB1ANY3 271 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 CBR3O75828 277 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 NFATC1O95644 943 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 MMP3P08254 477 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF286BP0CG31 522 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 LAMP1P11279 417 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 ETFAP13804 333 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 RBMS1P29558 406 aaKnown RBP6.37□□□□□ -1.39
VPS13B-205ENST00000493587 AGTR1P30556 359 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 GDNFP39905 211 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 MC3RP41968 323 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 FOXK1P85037 733 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 TTLL4Q14679 1199 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 MFSD14CQ5VZR4 134 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 GGNBP1Q5YKI7 109 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 TANGO2Q6ICL3 276 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF621Q6ZSS3 439 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 UNC93AQ86WB7 457 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 CNTN4Q8IWV2 1026 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 OR6V1Q8N148 313 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 C11orf42Q8N5U0 333 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 OR10AD1Q8NGE0 317 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 OR52B6Q8NGF0 335 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 FIBINQ8TAL6 211 aa6.37□□□□□ -1.39
VPS13B-205ENST00000493587 MRPS31Q92665 395 aaKnown RBP6.37□□□□□ -1.39
VPS13B-205ENST00000493587 URM1Q9BTM9 101 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms