RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	WHAMMP3	Q1A5X7	153 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	PRICKLE4	Q2TBC4	344 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	TRMT12	Q53H54	448 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CT45A2	Q5DJT8	189 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CFAP157	Q5JU67	520 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CPTP	Q5TA50	214 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	FAM205BP	Q63HN1	556 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	OR52E8	Q6IFG1	317 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	GRHL2	Q6ISB3	625 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602		Q6ZTK2	550 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	GALNT5	Q7Z7M9	940 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	ISCA2	Q86U28	154 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	LSR	Q86X29	649 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	NUDT13	Q86X67	352 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	FRAS1	Q86XX4	4008 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	IFT20	Q8IY31	132 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	GSPT2	Q8IYD1	628 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	MMGT1	Q8N4V1	131 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	OR4N2	Q8NGD1	307 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	HUS1B	Q8NHY5	278 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF473	Q8WTR7	871 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	RAB8B	Q92930	207 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CCDC126	Q96EE4	140 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	PHF21B	Q96EK2	531 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	ANKRD27	Q96NW4	1050 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	MRPL57	Q9BQC6	102 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF416	Q9BWM5	594 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	SHCBP1L	Q9BZQ2	653 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC17A5	Q9NRA2	495 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	MAT2B	Q9NZL9	334 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	FLRT3	Q9NZU0	649 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	REV1	Q9UBZ9	1251 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	ASB4	Q9Y574	426 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602		A0A087WUV0	522 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602		A0A087WZY1	265 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	GNG14	A0A1W2PPG7	69 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	C1orf226	A1L170	272 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF724	A8MTY0	619 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602		H3BQF6	201 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	UBXN8	O00124	270 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	PLPP1	O14494	284 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	RAD51C	O43502	376 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	TMPRSS11D	O60235	418 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	CDC14B	O60729	498 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ERAL1	O75616	437 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	SEMA3D	O95025	777 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ANGPTL1	O95841	491 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	CHEK2	O96017	543 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	C2	P06681	752 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	KLK1	P06870	262 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ITGA5	P08648	1049 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	CTAGE8	P0CG41	777 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	PSMA4	P25789	261 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	RAD52	P43351	418 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	GSTM5	P46439	218 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	CCT5	P48643	541 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	PSMD4	P55036	377 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	TRA2B	P62995	288 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	MRPS35	P82673	323 aa	Known RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	GUCY2D	Q02846	1103 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	C17orf67	Q0P5P2	114 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	MGAT2	Q10469	447 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF154	Q13106	437 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	RASA2	Q15283	850 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	DEFB112	Q30KQ8	113 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	SGO1	Q5FBB7	561 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	SPDYA	Q5MJ70	313 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	FRG2	Q64ET8	278 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	REP15	Q6BDI9	236 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	FAM180B	Q6P0A1	224 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	PGBD2	Q6P3X8	592 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	BLOC1S3	Q6QNY0	202 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	KLHL24	Q6TFL4	600 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	NPSR1	Q6W5P4	371 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ADAMTSL5	Q6ZMM2	481 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF620	Q6ZNG0	422 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	C9orf139	Q6ZV77	190 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	CMC1	Q7Z7K0	106 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	TRABD2A	Q86V40	505 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC22A9	Q8IVM8	553 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	CTAGE4	Q8IX94	777 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	PARP8	Q8N3A8	854 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	C17orf78	Q8N4C9	275 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	C11orf44	Q8N8P7	122 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	L3MBTL4	Q8NA19	623 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ATP6V1C2	Q8NEY4	427 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	OR4F15	Q8NGB8	312 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	OR52E4	Q8NGH9	312 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	OR52E2	Q8NGJ4	325 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	FBXO25	Q8TCJ0	367 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	UBTD2	Q8WUN7	234 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	SELENOM	Q8WWX9	145 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF75CP	Q92670	426 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	APH1A	Q96BI3	265 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ARL8A	Q96BM9	186 aa		4.58	□□□□□ -1.68
SEC13-219	ENST00000492602	ERP27	Q96DN0	273 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms