RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CCNA2P20248 432 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ASCL1P50553 236 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 HOXC5Q00444 222 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GKAP1Q5VSY0 366 aaPredicted RBP14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 C8orf82Q6P1X6 216 aaPredicted RBP14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CCDC80Q76M96 950 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SMYD1Q8NB12 490 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 EVA1AQ9H8M9 152 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CMTM6Q9NX76 183 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 USP22Q9UPT9 525 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PTPN13Q12923 2485 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PCNX1Q96RV3 2341 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TMEM72A0PK05 275 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CCT8L1PA6NM43 557 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ZNF208O43345 1280 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TNFSF13O75888 250 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CLK1P49759 484 aaKnown RBP14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MAP2K6P52564 334 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SLC7A2P52569 658 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RGS8P57771 180 aaPredicted RBP14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RAC3P60763 192 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 NCALDP61601 193 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 VEZF1Q14119 521 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TMPPEQ6ZT21 453 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MCEMP1Q8IX19 187 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SLC15A3Q8IY34 581 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CNEP1R1Q8N9A8 125 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 OR2T12Q8NG77 320 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SLC26A7Q8TE54 656 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RNF128Q8TEB7 428 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ROBO4Q8WZ75 1007 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TAMM41Q96BW9 452 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 DDIT4LQ96D03 193 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 LRRC46Q96FV0 321 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GMPPAQ96IJ6 420 aaPredicted RBP14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 OR11A1Q9GZK7 315 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PIGMQ9H3S5 423 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 NPDC1Q9NQX5 325 aaPredicted RBP14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TESQ9UGI8 421 aaKnown RBP14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 HDGFL3Q9Y3E1 203 aa14.57□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SULT2B1O00204 365 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SYT5O00445 386 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PMS2P2O95744 297 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PLGP00747 810 aaPredicted RBP14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 COX6B1P14854 86 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CXCR1P25024 350 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 KIR2DL2P43627 348 aaPredicted RBP14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CPA2P48052 419 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 KCNJ5P48544 419 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 DIO1P49895 249 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CSNK2A1P68400 391 aaPredicted RBP14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SIRPAP78324 504 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GUSBP1Q15486 140 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 DUSP7Q16829 419 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 FAM91A1Q658Y4 838 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ZNF787Q6DD87 383 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GTF2IRD2BQ6EKJ0 949 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 FCRLAQ7L513 359 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GTF2IRD2Q86UP8 949 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MICU2Q8IYU8 434 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CCDC197Q8NCU1 140 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GPR32P1Q8NGA4 272 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RASSF5Q8WWW0 418 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 C3orf49Q96BT1 292 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ARL5BQ96KC2 179 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ARHGDIGQ99819 225 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GLRX2Q9NS18 164 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 JKAMPQ9P055 326 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RPS6KB2Q9UBS0 482 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TAGLN3Q9UI15 199 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PACSIN3Q9UKS6 424 aa14.56□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ASH1LQ9NR48 2969 aaKnown RBP14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 IGHV3-15A0A0B4J1V0 119 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ELOVL7A1L3X0 281 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 NME4O00746 187 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 NDUFAB1O14561 156 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SS18L1O75177 396 aaPredicted RBP14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 LGI1O95970 557 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 C8BP07358 591 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CD247P20963 164 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ENPP1P22413 925 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 HTR2AP28223 471 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CTBP2P56545 445 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PSME3P61289 254 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 LIPEQ05469 1076 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MYBPHQ13203 477 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RNPS1Q15287 305 aaKnown RBP14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 NRF1Q16656 503 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 FBXL19-AS1Q494R0 122 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 VWA1Q6PCB0 445 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 FAM214BQ7L5A3 538 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ATG4DQ86TL0 474 aaPredicted RBP14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RANBP3LQ86VV4 465 aaPredicted RBP14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SLC43A2Q8N370 569 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 LSMEM1Q8N8F7 131 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ACBD4Q8NC06 268 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 OR52E4Q8NGH9 312 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RNASE6Q93091 150 aaKnown RBP14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 STARD4Q96DR4 205 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ZHX1-C8orf76Q96EF9 292 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms