RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 CCT5P48643 541 aa18.09■□□□□ 0.49
CLIP2-208ENST00000491075 BHLHB9Q6PI77 547 aa18.09■□□□□ 0.49
CLIP2-208ENST00000491075 DDIASQ8IXT1 998 aa18.09■□□□□ 0.49
CLIP2-208ENST00000491075 WDR31Q8NA23 367 aa18.09■□□□□ 0.49
CLIP2-208ENST00000491075 OR5D16Q8NGK9 328 aa18.09■□□□□ 0.49
CLIP2-208ENST00000491075 MYOZ1Q9NP98 299 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-208ENST00000491075 DCTN4Q9UJW0 460 aa18.09■□□□□ 0.49
CLIP2-208ENST00000491075 HDGFL3Q9Y3E1 203 aa18.09■□□□□ 0.49
CLIP2-208ENST00000491075 PDLIM1O00151 329 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 ANKRD28O15084 1053 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 C6orf47O95873 294 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 UBTFL6P0CB48 400 aaPredicted RBP18.08■□□□□ 0.48
CLIP2-208ENST00000491075 NTF4P34130 210 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 FOXG1P55316 489 aaPredicted RBP18.08■□□□□ 0.48
CLIP2-208ENST00000491075 GPR68Q15743 365 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 SWI5Q1ZZU3 235 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 CASP12Q6UXS9 341 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 EIF3MQ7L2H7 374 aaKnown RBP18.08■□□□□ 0.48
CLIP2-208ENST00000491075 SORCS2Q96PQ0 1159 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 SLC17A5Q9NRA2 495 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 CHRNA9Q9UGM1 479 aa18.08■□□□□ 0.48
CLIP2-208ENST00000491075 LOC390937A0A1W2PQ73 354 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 DUXAA6NLW8 204 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 ATP6V1G2-DDX39BF2Z307 99 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 STX11O75558 287 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 FKBP2P26885 142 aaKnown RBP18.07■□□□□ 0.48
CLIP2-208ENST00000491075 CRHR1P34998 444 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 MAGEA8P43361 318 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 TGFBR3Q03167 851 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 MNS1Q8NEH6 495 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 OR52E4Q8NGH9 312 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 OR5AK3PQ8NH89 298 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 TWIST2Q8WVJ9 160 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 C3orf49Q96BT1 292 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 FBXO17Q96EF6 278 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 ARL5BQ96KC2 179 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 PPP3R2Q96LZ3 170 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 PRPF18Q99633 342 aaKnown RBP18.07■□□□□ 0.48
CLIP2-208ENST00000491075 CCDC106Q9BWC9 280 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 UPB1Q9UBR1 384 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 KCNE5Q9UJ90 142 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 MID2Q9UJV3 735 aa18.07■□□□□ 0.48
CLIP2-208ENST00000491075 IGHV4-61A0A0C4DH41 118 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 CENPVL1A0A0U1RR11 272 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 CFLARO15519 480 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 KIAA0513O60268 411 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 LYPLA1O75608 230 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-208ENST00000491075 UGT2B17O75795 530 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 CLK1P49759 484 aaKnown RBP18.06■□□□□ 0.48
CLIP2-208ENST00000491075 SNRPD2P62316 118 aaKnown RBP18.06■□□□□ 0.48
CLIP2-208ENST00000491075 SLC25A3Q00325 362 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 PTGR1Q14914 329 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 KLHL24Q6TFL4 600 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 RFLNBQ8N5W9 214 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 FAM71CQ8NEG0 241 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 OIT3Q8WWZ8 545 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 COQ8BQ96D53 544 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 CTPS2Q9NRF8 586 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 PARPBPQ9NWS1 579 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 SLC9A8Q9Y2E8 581 aa18.06■□□□□ 0.48
CLIP2-208ENST00000491075 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLIP2-208ENST00000491075 PIP5K1BO14986 540 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 FCMRO60667 390 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 TGFAP01135 160 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 ZNF23P17027 643 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 SOAT1P35610 550 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 RPS26P62854 115 aaKnown RBP18.05■□□□□ 0.48
CLIP2-208ENST00000491075 MST1LQ2TV78 715 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 ARHGAP11BQ3KRB8 267 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 C9orf135Q5VTT2 229 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 GRINAQ7Z429 371 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 C10orf107Q8IVU9 208 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 CCDC103Q8IW40 242 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 ZNF540Q8NDQ6 660 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 ZNF563Q8TA94 476 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 GATA5Q9BWX5 397 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-208ENST00000491075 BHLHE41Q9C0J9 482 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-208ENST00000491075 ZNF350Q9GZX5 532 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 C12orf65Q9H3J6 166 aaKnown RBP18.05■□□□□ 0.48
CLIP2-208ENST00000491075 MKLN1Q9UL63 735 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 MOKQ9UQ07 419 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 SLC35A3Q9Y2D2 325 aa18.05■□□□□ 0.48
CLIP2-208ENST00000491075 TMEM233B4DJY2 109 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 TCF21O43680 179 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 WNT11O96014 354 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 FGF4P08620 206 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 MATN1P21941 496 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 PGM1P36871 562 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 PRPS1P60891 318 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 HBA1P69905 142 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 H3F3AP84243 136 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 CARTPTQ16568 116 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 CR1LQ2VPA4 569 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 IQCCQ4KMZ1 466 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 C16orf62Q7Z3J2 963 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 DNAJA3Q96EY1 480 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 FOXN4Q96NZ1 517 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 OR11A1Q9GZK7 315 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 SERHL2Q9H4I8 314 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 SLC7A10Q9NS82 523 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms