RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DEGS2Q6QHC5 323 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM107Q6UX40 140 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 FRA10AC1Q70Z53 315 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 OFCC1Q8IZS5 231 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TCAIMQ8N3R3 496 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ICA1LQ8NDH6 482 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SLC22A8Q8TCC7 542 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RASSF5Q8WWW0 418 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 PLEKHA8Q96JA3 519 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SP140LQ9H930 580 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 Q9HAA7 133 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SAR1AQ9NR31 198 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 YAE1D1Q9NRH1 226 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 MED17Q9NVC6 651 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 DAPK2Q9UIK4 370 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GNPTGQ9UJJ9 305 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CFL2Q9Y281 166 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TNFRSF18Q9Y5U5 241 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 IGLV9-49A0A0B4J1Y8 123 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SLCO1B7G3V0H7 640 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 PSMD11O00231 422 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 PGRMC1O00264 195 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ZW10O43264 779 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TIMM8AO60220 97 aaPredicted RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GMDSO60547 372 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 FKBP6O75344 327 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 AQP8O94778 261 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ALOX5P09917 674 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SP9P0CG40 484 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 PRPS2P11908 318 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CTRB1P17538 263 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 M6PRP20645 277 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CRABP2P29373 138 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM50BP56557 158 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 HAND2P61296 217 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LRRC63Q05C16 580 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TRAP1Q12931 704 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SF3B4Q15427 424 aaKnown RBP eCLIP2.52□□□□□ -2.017e-7■■■■□ 25.2
UBXN4-208ENST00000490163 ODF3L2Q3SX64 289 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SPANXN2Q5MJ10 180 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 HECTD2Q5U5R9 776 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 STUMQ69YW2 141 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SUMO4Q6EEV6 95 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CTRB2Q6GPI1 263 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RFWD3Q6PCD5 774 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SHC4Q6S5L8 630 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 KIF6Q6ZMV9 814 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 PIGZQ86VD9 579 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 DND1Q8IYX4 353 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ALLCQ8N6M5 410 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ATP6V0D2Q8N8Y2 350 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 DYRK2Q92630 601 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RND1Q92730 232 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 MRGPRFQ96AM1 343 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TAMM41Q96BW9 452 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ECHDC3Q96DC8 303 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CEP19Q96LK0 163 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CCNL2Q96S94 520 aaPredicted RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GON7Q9BXV9 100 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SLC25A51Q9H1U9 297 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 EBF3Q9H4W6 596 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SIAEQ9HAT2 523 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SLC2A8Q9NY64 477 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GTSE1Q9NYZ3 720 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CTSFQ9UBX1 484 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GMPPBQ9Y5P6 360 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RNF215Q9Y6U7 377 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LCTP09848 1927 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM213A2RRL7 107 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 EEF2KO00418 725 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 MLNRO43193 412 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CTSVO60911 334 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 FAM20BO75063 409 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SERPINI2O75830 405 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CLDN14O95500 239 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 BMP15O95972 392 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GLUD1P00367 558 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ATP1B1P05026 303 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 S100A6P06703 90 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SLC35G4P0C7Q5 338 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 PRSS56P0CW18 603 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ATF6P18850 670 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 POLR2CP19387 275 aaPredicted RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CFL1P23528 166 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RPL4P36578 427 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 GLUD2P49448 558 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SEC61A1P61619 476 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 MRPS15P82914 257 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CNTN1Q12860 1018 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ITGADQ13349 1161 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LRRC36Q1X8D7 754 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 C1orf146Q5VVC0 180 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 HACD2Q6Y1H2 254 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 USP43Q70EL4 1123 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LRRC6Q86X45 466 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ANGPTL6Q8NI99 470 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 APOBEC4Q8WW27 367 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LRRC39Q96DD0 335 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 MTBPQ96DY7 904 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms