RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CTBSQ01459 385 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 TSPAN31Q12999 210 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 ARL6IP1Q15041 203 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 SULF2Q8IWU5 870 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 BPIFB2Q8N4F0 458 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 ARPC4-TTLL3A0A0A6YYG9 625 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 ATG12O94817 140 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 CA3P07451 260 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 PIGAP37287 484 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 DLX5P56178 289 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 MAT1AQ00266 395 aaKnown RBP16.44■□□□□ 0.22
NPHP4-209ENST00000489180 TNK1Q13470 666 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 GALEQ14376 348 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 TMEM244Q5VVB8 128 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 KIAA0895LQ68EN5 471 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 SBSNQ6UWP8 590 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 MZB1Q8WU39 189 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 NIPSNAP1Q9BPW8 284 aa16.44■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF705FA8MVS1 300 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 MAN2B1O00754 1011 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 CSO75390 466 aaKnown RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 IFNA10P01566 189 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF705DP0CH99 300 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF705BP0CI00 300 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 TAS2R19P59542 299 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 KCNJ10P78508 379 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 SLC39A11Q8N1S5 342 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 OR2M2Q96R28 347 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 NT5DC2Q9H857 520 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF281Q9Y2X9 895 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 I6L893 689 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 SHC1P29353 583 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 CX3CR1P49238 355 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 WBP2NLQ6ICG8 309 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 OLIG3Q7RTU3 272 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 SLC35F3Q8IY50 421 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 OR5H6Q8NGV6 325 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 POC1BQ8TC44 478 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 HHIPQ96QV1 700 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 TXNL4BQ9NX01 149 aaKnown RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 LTB4RQ15722 352 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 VRK3Q8IV63 474 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 TEX37Q96LM6 180 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 LMF2Q9BU23 707 aaKnown RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 PITHD1Q9GZP4 211 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 KLHL13Q9P2N7 655 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF223Q9UK11 482 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 SHOXO15266 292 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 AQP9O43315 295 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 FBXO24O75426 580 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 KCNK5O95279 499 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 WDPCPO95876 746 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 IMPA1P29218 277 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 SLC1A3P43003 542 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 CSNK1A1P48729 337 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 CSNK1DP48730 415 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 TGM4P49221 684 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 EEF1A1P68104 462 aaKnown RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 POU3F1Q03052 451 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 ZP2Q05996 745 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 PDE7AQ13946 482 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 C14orf28Q4W4Y0 310 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 EXOSC6Q5RKV6 272 aaKnown RBP16.43■□□□□ 0.22
NPHP4-209ENST00000489180 SLC35D2Q76EJ3 337 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 C1GALT1Q9NS00 363 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 ATPIF1Q9UII2 106 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 FBXL2Q9UKC9 423 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 C5P01031 1676 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 MYO10Q9HD67 2058 aa16.43■□□□□ 0.22
NPHP4-209ENST00000489180 OR2T1O43869 369 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 APEX1P27695 318 aaKnown RBP16.42■□□□□ 0.22
NPHP4-209ENST00000489180 OR4M1Q8NGD0 313 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 HCAR1Q9BXC0 346 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 PPA2Q9H2U2 334 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 CD300LBA8K4G0 201 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SLC34A2O95436 690 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 TP53P04637 393 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-209ENST00000489180 EMP2P54851 167 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SLC14A2Q15849 920 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 FAM109AQ8N4B1 249 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SUMF2Q8NBJ7 301 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SPIN2AQ99865 258 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SPIN2BQ9BPZ2 258 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 OR10A5Q9H207 317 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 OR10A2Q9H208 303 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 CHRDQ9H2X0 955 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 EHFQ9NZC4 300 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 BOLA1Q9Y3E2 137 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SCG5P05408 212 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 CLEC2LP0C7M8 214 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 CHRNB1P11230 501 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 PLCXD3Q63HM9 321 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SLC39A13Q96H72 371 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 METTL15A6NJ78 407 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 SOCS6O14544 535 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF217O75362 1048 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 CD79BP40259 229 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 RPL22L1Q6P5R6 122 aaKnown RBP16.42■□□□□ 0.22
NPHP4-209ENST00000489180 ALKAL1Q6UXT8 129 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms