RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 RCBTB2O95199 551 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 CH25HO95992 272 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 IGF2P01344 180 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 IGFBP1P08833 259 aaPredicted RBP9.1□□□□□ -0.95
USP11-211ENST00000489111 PRKCAP17252 672 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 APOBEC1P41238 236 aaKnown RBP9.1□□□□□ -0.95
USP11-211ENST00000489111 MYBPC1Q00872 1141 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 CD47Q08722 323 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 FOXF1Q12946 379 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 TUBA3CQ13748 450 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 GINS1Q14691 196 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 CRTC2Q53ET0 693 aaPredicted RBP9.1□□□□□ -0.95
USP11-211ENST00000489111 CLEC12AQ5QGZ9 265 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 SLX4IPQ5VYV7 408 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 TMEM236Q5W0B7 351 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 SLC27A4Q6P1M0 643 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 TUBA3EQ6PEY2 450 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 C5orf46Q6UWT4 87 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 ARSKQ6UWY0 536 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 MDGA2Q7Z553 956 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 OAFQ86UD1 273 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 KIF18BQ86Y91 864 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 IQCF1Q8N6M8 205 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 FADS6Q8N9I5 356 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 ZNF248Q8NDW4 579 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 OR1J4Q8NGS1 313 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 C1GALT1C1Q96EU7 318 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 TMEM41AQ96HV5 264 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 MRGPRX4Q96LA9 322 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 SLC38A2Q96QD8 506 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 TSSK6Q9BXA6 273 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 ADNPQ9H2P0 1102 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 ZNF696Q9H7X3 374 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 SLC25A19Q9HC21 320 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 SERINC1Q9NRX5 453 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 RASSF1Q9NS23 344 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 LRFN1Q9P244 771 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 ZNF337Q9Y3M9 751 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 PCDHGB5Q9Y5G0 923 aa9.1□□□□□ -0.95
USP11-211ENST00000489111 SPIN1Q9Y657 262 aaPredicted RBP9.1□□□□□ -0.95
USP11-211ENST00000489111 TRAV36DV7A0A075B6V5 113 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 TRAV27A0A087WT01 109 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 A8MVM7 634 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 E9PQ18 207 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 AHSA1O95433 338 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 F10P00742 488 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 TP53P04637 393 aaPredicted RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 HIST1H2ABP04908 130 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 BMP7P18075 431 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 WT1P19544 449 aaPredicted RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 TCEA1P23193 301 aaKnown RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 CD96P40200 585 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 EIF1P41567 113 aaKnown RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 SLC9A3P48764 834 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 ISL1P61371 349 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 MFAP5Q13361 173 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 TOP3AQ13472 1001 aaPredicted RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 MAD2L1BPQ15013 274 aaPredicted RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 OR1C1Q15619 314 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.09□□□□□ -0.95
USP11-211ENST00000489111 CTU2Q2VPK5 515 aaKnown RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 DEFB109BQ30KR1 87 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 PLPPR5Q32ZL2 321 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 KCTD21Q4G0X4 260 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 RBM48Q5RL73 367 aaKnown RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 C12orf73Q69YU5 71 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 TIGD3Q6B0B8 471 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 SMARCD3Q6STE5 483 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 PTCHD4Q6ZW05 846 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 HIST3H2AQ7L7L0 130 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 NANOGNBQ7Z5D8 188 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 CCDC71Q8IV32 467 aaPredicted RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 ENTHD1Q8IYW4 607 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 SLC43A2Q8N370 569 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 WDSUB1Q8N9V3 476 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 OR2T33Q8NG76 320 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 OR8D4Q8NGM9 314 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 OR51A7Q8NH64 312 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 CNIH3Q8TBE1 160 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 HDAC2Q92769 488 aaKnown RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 GATA6Q92908 595 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 HIST1H2ACQ93077 130 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 ZBTB8AQ96BR9 441 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 ZNF524Q96C55 264 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 DDIT4LQ96D03 193 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 PLEKHA8Q96JA3 519 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 SAMD8Q96LT4 415 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 YTHDF1Q9BYJ9 559 aaKnown RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 PLA2G12AQ9BZM1 189 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 OR52D1Q9H346 318 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 CHRNA9Q9UGM1 479 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 FBXL2Q9UKC9 423 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 BOKQ9UMX3 212 aaPredicted RBP9.09□□□□□ -0.95
USP11-211ENST00000489111 RNF6Q9Y252 685 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 HRH3Q9Y5N1 445 aa9.09□□□□□ -0.95
USP11-211ENST00000489111 DMXL1Q9Y485 3027 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 A0A0G2JMM0 328 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 A0A1W2PPB8 328 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms