RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 BCAS1O75363 584 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 GCM2O75603 506 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 C1QCP02747 245 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 THBDP07204 575 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 MDH1P40925 334 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 CRATP43155 626 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 OR3A2P47893 321 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 IDH2P48735 452 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 MRPL19P49406 292 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 POLR2HP52434 150 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 MAP2K6P52564 334 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 IRX1P78414 480 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 PDK3Q15120 406 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 ACKR1Q16570 336 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 ZSWIM7Q19AV6 140 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 LIN52Q52LA3 116 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 SFRP5Q5T4F7 317 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 MRPL2Q5T653 305 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 ABLIM2Q6H8Q1 611 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 Q6ZT83 130 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 HMGN2P46Q86SG4 172 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 MTDHQ86UE4 582 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 OR9I1Q8NGQ6 314 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 PIGXQ8TBF5 258 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 CKAP2Q8WWK9 683 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 CNOT9Q92600 299 aaKnown RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 KISS1RQ969F8 398 aaPredicted RBP12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 DDIT4LQ96D03 193 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 CCL19Q99731 98 aa12.27□□□□□ -0.45
SPTLC1-207ENST00000488921 CFAP73A6NFT4 308 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 ARHGEF9O43307 516 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 SMPD2O60906 423 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 CNOT4O95628 575 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 BCHEP06276 602 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 ETFAP13804 333 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 LOXP28300 417 aaPredicted RBP12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC1A3P43003 542 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 MVDP53602 400 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 ADAM8P78325 824 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 PLAURQ03405 335 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 FOXD4Q12950 439 aaPredicted RBP12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 FADDQ13158 208 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 ITGADQ13349 1161 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 LARS2Q15031 903 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 RNF220Q5VTB9 566 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 SHEQ5VZ18 495 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 C22orf34Q6ZV56 151 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 SSX8Q7RTT4 187 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 GALNT5Q7Z7M9 940 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 WFDC8Q8IUA0 241 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 LRRC75A-AS1Q8N1F1 130 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 VPS33AQ96AX1 596 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 S100PBPQ96BU1 408 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 HS3ST6Q96QI5 342 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 POTEKPQ9BYX7 375 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 ARMC7Q9H6L4 198 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC6A13Q9NSD5 602 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 FAM53CQ9NYF3 392 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 DSPPQ9NZW4 1301 aa12.26□□□□□ -0.45
SPTLC1-207ENST00000488921 IGKV3D-15A0A087WSY6 115 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 TMED7-TICAM2A0A0A6YYA0 188 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 AP3D1O14617 1153 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 GPR171O14626 319 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF208O43345 1280 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 KLF4O43474 513 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 EIF1BO60739 113 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ADAP00813 363 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 THBS1P07996 1170 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 FOSL1P15407 271 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 NKX6-1P78426 367 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 EPS8Q12929 822 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF704Q6ZNC4 412 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ADGRG3Q86Y34 549 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF100Q8IYN0 542 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 OR52P1PQ8NH57 321 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 HSD17B8Q92506 261 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 GTF2H4Q92759 462 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 PLPPR2Q96GM1 343 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ARL5BQ96KC2 179 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF300Q96RE9 604 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 CCDC28BQ9BUN5 200 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 TMEM181Q9P2C4 612 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ING1Q9UK53 422 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF232Q9UNY5 417 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 TRAPPC4Q9Y296 219 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF443Q9Y2A4 671 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 IFT52Q9Y366 437 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 TMED7Q9Y3B3 224 aa12.25□□□□□ -0.45
SPTLC1-207ENST00000488921 A0A096LPI6 279 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 A0A0G2JPF8 293 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 CDHR4A6H8M9 788 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 HNRNPCL2B2RXH8 293 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 HNRNPCL3B7ZW38 293 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 HNRNPCL1O60812 293 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 TMCC2O75069 709 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 ADAM11O75078 769 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 VIMP08670 466 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 TFPTP0C1Z6 253 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 HNRNPCL4P0DMR1 293 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms