RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 RNPS1Q15287 305 aaKnown RBP13.49□□□□□ -0.25
CXCL12-207ENST00000488591 VMACQ2NL98 169 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 MEX3BQ6ZN04 569 aaKnown RBP13.49□□□□□ -0.25
CXCL12-207ENST00000488591 PIGWQ7Z7B1 504 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 ADGRG3Q86Y34 549 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 SLC26A7Q8TE54 656 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 RNASE6Q93091 150 aaKnown RBP13.49□□□□□ -0.25
CXCL12-207ENST00000488591 MARVELD3Q96A59 401 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 DDIT4LQ96D03 193 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 GMPPAQ96IJ6 420 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-207ENST00000488591 HOPXQ9BPY8 73 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-207ENST00000488591 ADAM19Q9H013 955 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 ENKD1Q9H0I2 346 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 RPS6KB2Q9UBS0 482 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 OSGIN1Q9UJX0 560 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 PACSIN3Q9UKS6 424 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 MED12LQ86YW9 2145 aa13.49□□□□□ -0.25
CXCL12-207ENST00000488591 HCFC1P51610 2035 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 M0QX08 132 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 SULT2B1O00204 365 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 ZNF208O43345 1280 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 TNFSF13O75888 250 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 DCTN3O75935 186 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
CXCL12-207ENST00000488591 MFN2O95140 757 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 PRDX6P30041 224 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 CPA2P48052 419 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 DIO1P49895 249 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 GZMMP51124 257 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 PCBP3P57721 371 aaKnown RBP13.48□□□□□ -0.25
CXCL12-207ENST00000488591 SIRPAP78324 504 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 ZNF239Q16600 458 aaKnown RBP13.48□□□□□ -0.25
CXCL12-207ENST00000488591 FBXL19-AS1Q494R0 122 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 TMPPEQ6ZT21 453 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 FAM214BQ7L5A3 538 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 KIF18BQ86Y91 864 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 TREML1Q86YW5 311 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 SLC43A2Q8N370 569 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 RASSF5Q8WWW0 418 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 ROBO4Q8WZ75 1007 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 ZHX1-C8orf76Q96EF9 292 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 SRXN1Q9BYN0 137 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 COQ10BQ9H8M1 238 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 NPDC1Q9NQX5 325 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-207ENST00000488591 JKAMPQ9P055 326 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 HDGFL3Q9Y3E1 203 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 CHST2Q9Y4C5 530 aa13.48□□□□□ -0.25
CXCL12-207ENST00000488591 INTS1Q8N201 2190 aaKnown RBP13.47□□□□□ -0.25
CXCL12-207ENST00000488591 NDUFAB1O14561 156 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 MSTNO14793 375 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 FRS3O43559 492 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 TPST1O60507 370 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 PRKD3O94806 890 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 C8BP07358 591 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 PRG2P13727 222 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 ENPP1P22413 925 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 KIR2DL2P43627 348 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-207ENST00000488591 NCALDP61601 193 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 VEZF1Q14119 521 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 HACD2Q6Y1H2 254 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 FCRLAQ7L513 359 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 LUZP2Q86TE4 346 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 CALHM3Q86XJ0 350 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 ZNF583Q96ND8 569 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 LRRC37BQ96QE4 947 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 CCT8L2Q96SF2 557 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 TRIM2Q9C040 744 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 PROCRQ9UNN8 238 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
CXCL12-207ENST00000488591 TMEM72A0PK05 275 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 DNPH1O43598 174 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 PMS2P2O95744 297 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 IFNA14P01570 189 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 NUDT2P50583 147 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 RGS8P57771 180 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 HOXC5Q00444 222 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 DMTNQ08495 405 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 MYBPHQ13203 477 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 TMEM201Q5SNT2 666 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 GKAP1Q5VSY0 366 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 VWA1Q6PCB0 445 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 CCDC80Q76M96 950 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 RANBP3LQ86VV4 465 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 DMRTC2Q8IXT2 367 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 SMYD1Q8NB12 490 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 OR2T12Q8NG77 320 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 OR52E4Q8NGH9 312 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 OR6K3Q8NGY3 331 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 RNF128Q8TEB7 428 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 ZNF559Q9BR84 538 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 GPATCH1Q9BRR8 931 aaKnown RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 TACO1Q9BSH4 297 aaKnown RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 RBM24Q9BX46 236 aaKnown RBP13.46□□□□□ -0.25
CXCL12-207ENST00000488591 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 TMEM27Q9HBJ8 222 aa13.46□□□□□ -0.25
CXCL12-207ENST00000488591 GP6Q9HCN6 339 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms