RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 HS3ST6Q96QI5 342 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 ZNF300Q96RE9 604 aaPredicted RBP15.78■□□□□ 0.12
ITGB1-215ENST00000488494 CXXC4Q9H2H0 198 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 BCO1Q9HAY6 547 aa15.78■□□□□ 0.12
ITGB1-215ENST00000488494 THUMPD1Q9NXG2 353 aaKnown RBP15.78■□□□□ 0.12
ITGB1-215ENST00000488494 ABCA4P78363 2273 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 TMED7-TICAM2A0A0A6YYA0 188 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 CDHR4A6H8M9 788 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 CLIC1O00299 241 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 NUDT7P0C024 238 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 PSMB1P20618 241 aaKnown RBP15.77■□□□□ 0.12
ITGB1-215ENST00000488494 POLR2HP52434 150 aaKnown RBP15.77■□□□□ 0.12
ITGB1-215ENST00000488494 RASGEF1BQ0VAM2 473 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 SQLEQ14534 574 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 RGNQ15493 299 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 MSRB3Q8IXL7 192 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 GABRG1Q8N1C3 465 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 MAL2Q969L2 176 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 MBD6Q96DN6 1003 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 MAGEB18Q96M61 343 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 ALPK1Q96QP1 1244 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 RAD21L1Q9H4I0 556 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 CACYBPQ9HB71 228 aaKnown RBP15.77■□□□□ 0.12
ITGB1-215ENST00000488494 A4GALTQ9NPC4 353 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 SLC25A37Q9NYZ2 338 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 TMED7Q9Y3B3 224 aa15.77■□□□□ 0.12
ITGB1-215ENST00000488494 FAAHO00519 579 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 GCM2O75603 506 aaPredicted RBP15.76■□□□□ 0.11
ITGB1-215ENST00000488494 PMS2P2O95744 297 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 GKN3PP0CG01 181 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 TACR3P29371 465 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 SLC1A3P43003 542 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 HTR3AP46098 478 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 ATP4BP51164 291 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 TSC22D1Q15714 1073 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 AGKQ53H12 422 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 LRIF1Q5T3J3 769 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 RNF220Q5VTB9 566 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.76■□□□□ 0.11
ITGB1-215ENST00000488494 ADGRG3Q86Y34 549 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 WFDC8Q8IUA0 241 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF440Q8IYI8 595 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 S100PBPQ96BU1 408 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF775Q96BV0 537 aaPredicted RBP15.76■□□□□ 0.11
ITGB1-215ENST00000488494 ZHX1-C8orf76Q96EF9 292 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 UBTD1Q9HAC8 227 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 OSGIN1Q9UJX0 560 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 GPR52Q9Y2T5 361 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 HDGFL3Q9Y3E1 203 aa15.76■□□□□ 0.11
ITGB1-215ENST00000488494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-215ENST00000488494 TMEM72A0PK05 275 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 THBS1P07996 1170 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 IL32P24001 234 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 EDNRAP25101 427 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 LOXP28300 417 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-215ENST00000488494 FADDQ13158 208 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 LARS2Q15031 903 aaKnown RBP15.75■□□□□ 0.11
ITGB1-215ENST00000488494 DEFB113Q30KQ7 82 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 PAGE3Q5JUK9 113 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 CADM2Q8N3J6 435 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 STEAP2Q8NFT2 490 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 DDIT4LQ96D03 193 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 NPHS2Q9NP85 383 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 SLC52A3Q9NQ40 469 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 EMC3Q9P0I2 261 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 SLAMF8Q9P0V8 285 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 DCTN4Q9UJW0 460 aa15.75■□□□□ 0.11
ITGB1-215ENST00000488494 A0A0G2JPF8 293 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF724A8MTY0 619 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 HNRNPCL2B2RXH8 293 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF814B7Z6K7 855 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 HNRNPCL3B7ZW38 293 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 ZNF208O43345 1280 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 DNPH1O43598 174 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 HNRNPCL1O60812 293 aaKnown RBP15.74■□□□□ 0.11
ITGB1-215ENST00000488494 EDF1O60869 148 aaKnown RBP15.74■□□□□ 0.11
ITGB1-215ENST00000488494 ADAP00813 363 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 HNRNPCL4P0DMR1 293 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 BMP2P12643 396 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 CD53P19397 219 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 OR3A2P47893 321 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 CLK1P49759 484 aaKnown RBP15.74■□□□□ 0.11
ITGB1-215ENST00000488494 OR2B6P58173 313 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 GCNT6Q5T4J0 391 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 ALKBH2Q6NS38 261 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 GALNT5Q7Z7M9 940 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 MTDHQ86UE4 582 aaKnown RBP15.74■□□□□ 0.11
ITGB1-215ENST00000488494 CLIP4Q8N3C7 705 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 BBS10Q8TAM1 723 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 PIGXQ8TBF5 258 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 STON2Q8WXE9 905 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 KISS1RQ969F8 398 aaPredicted RBP15.74■□□□□ 0.11
ITGB1-215ENST00000488494 OR10A4Q9H209 315 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 TMEM45AQ9NWC5 275 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 VAPAQ9P0L0 249 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.74■□□□□ 0.11
ITGB1-215ENST00000488494 PRSS50Q9UI38 385 aa15.74■□□□□ 0.11
ITGB1-215ENST00000488494 IGKV3D-15A0A087WSY6 115 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 TRBV5-3A0A0A0MS03 114 aa15.73■□□□□ 0.11
ITGB1-215ENST00000488494 ZC3H12DA2A288 527 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms