RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TMED7-TICAM2A0A0A6YYA0 188 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 A0A1B0GWA3 101 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 TRAPPC13A5PLN9 417 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 ELOA3DA6NLF2 546 aaPredicted RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 CPSF4LA6NMK7 179 aaKnown RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 ETV2O00321 342 aaPredicted RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 PRRG2O14669 202 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 WISP2O76076 250 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 TPOP07202 933 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 TFPIP10646 304 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 UMPSP11172 480 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 HOXB6P17509 224 aaKnown RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 ATP6V1B2P21281 511 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 ELK4P28324 431 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 SLC7A1P30825 629 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 STARP49675 285 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 DLX5P56178 289 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 B3GALT5-AS1P59052 145 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 RPS3AP61247 264 aaKnown RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 SRYQ05066 204 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 SELENBP1Q13228 472 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 ELOA3BQ3SY89 546 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 GXYLT1Q4G148 440 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 ALG10BQ5I7T1 473 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 VASNQ6EMK4 673 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 C3orf33Q6P1S2 294 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 ZNF605Q86T29 641 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 C10orf67Q8IYJ2 551 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 UBQLNLQ8IYU4 475 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 ELOA3Q8NG57 546 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 OR4D11Q8NGI4 311 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 POC1BQ8TC44 478 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 SLC25A43Q8WUT9 341 aaPredicted RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 DDIT4LQ96D03 193 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 RSRC1Q96IZ7 334 aaKnown RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 SEPHS2Q99611 448 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 WFDC6Q9BQY6 131 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 FNDC11Q9BVV2 318 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 AMBRA1Q9C0C7 1298 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 ADAM19Q9H013 955 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 MAGIXQ9H6Y5 334 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 C12orf10Q9HB07 376 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 TIGARQ9NQ88 270 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 CTPS2Q9NRF8 586 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 SPRR3Q9UBC9 169 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 CHRNA9Q9UGM1 479 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 OSGIN1Q9UJX0 560 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 AURKCQ9UQB9 309 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 CAMK2AQ9UQM7 478 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 TMED7Q9Y3B3 224 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 EXPH5Q8NEV8 1989 aa9.29□□□□□ -0.92
SKA1-204ENST00000488454 TLN1Q9Y490 2541 aaKnown RBP9.29□□□□□ -0.92
SKA1-204ENST00000488454 ERICH4A6NGS2 130 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 AHRRA9YTQ3 701 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 H0Y3Z8 333 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 hCG_2039718K7EN88 272 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 SEC14L5O43304 696 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 TPST2O60704 377 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 SLC19A2O60779 497 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 C1QL1O75973 258 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 OR5F1O95221 314 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 NTN1O95631 604 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 OPN1LWP04000 364 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 FABP3P05413 133 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 GPIP06744 558 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 THRBP10828 461 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 GABRA1P14867 456 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 CPN1P15169 458 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 PSMA4P25789 261 aaKnown RBP9.28□□□□□ -0.92
SKA1-204ENST00000488454 HTR2AP28223 471 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 SFTPDP35247 375 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 YAP1P46937 504 aaKnown RBP9.28□□□□□ -0.92
SKA1-204ENST00000488454 CLK1P49759 484 aaKnown RBP9.28□□□□□ -0.92
SKA1-204ENST00000488454 CDH12P55289 794 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 SMIM11AP58511 58 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 CRYZQ08257 329 aaKnown RBP9.28□□□□□ -0.92
SKA1-204ENST00000488454 ST3GAL3Q11203 375 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 FOXD4Q12950 439 aaPredicted RBP9.28□□□□□ -0.92
SKA1-204ENST00000488454 PIN1Q13526 163 aaPredicted RBP9.28□□□□□ -0.92
SKA1-204ENST00000488454 NPTX1Q15818 432 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 SGCBQ16585 318 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 TMEM176BQ3YBM2 270 aaPredicted RBP9.28□□□□□ -0.92
SKA1-204ENST00000488454 ZNF585AQ6P3V2 769 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 ADGRG3Q86Y34 549 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 ZDHHC21Q8IVQ6 265 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 GALNT11Q8NCW6 608 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 OR5M9Q8NGP3 310 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 ADAMTS16Q8TE57 1224 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 EDARADDQ8WWZ3 215 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 MIB2Q96AX9 1013 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 C3orf49Q96BT1 292 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 ZNF524Q96C55 264 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 SLC41A3Q96GZ6 507 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 PRRC1Q96M27 445 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 ZNF347Q96SE7 839 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 NPAS1Q99742 590 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 TMEM185BQ9H7F4 350 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 YY1AP1Q9H869 796 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 IL1RAPQ9NPH3 570 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 TNFRSF10DQ9UBN6 386 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms