RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 TLX1P31314 330 aaPredicted RBP3.72□□□□□ -1.81
CNN3-206ENST00000487539 PTGDSP41222 190 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 EEF1A1P68104 462 aaKnown RBP3.72□□□□□ -1.81
CNN3-206ENST00000487539 ITIH4Q14624 930 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 KCNJ11Q14654 390 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 P2RY6Q15077 328 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 PLECQ15149 4684 aaKnown RBP3.72□□□□□ -1.81
CNN3-206ENST00000487539 TAF11Q15544 211 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 KBTBD12Q3ZCT8 623 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 EEF1A1P5Q5VTE0 462 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 TIGD3Q6B0B8 471 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 FAHD2BQ6P2I3 314 aaPredicted RBP3.72□□□□□ -1.81
CNN3-206ENST00000487539 PACS1Q6VY07 963 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 SHFQ7M4L6 423 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 PID1Q7Z2X4 250 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 CARM1Q86X55 608 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 CPOQ8IVL8 374 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 UBQLNLQ8IYU4 475 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 PRR22Q8IZ63 422 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 MUC15Q8N387 334 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 NEXN-AS1Q8NBZ9 246 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 CAMKVQ8NCB2 501 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 GJC3Q8NFK1 279 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 SPPL2AQ8TCT8 520 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 KCTD4Q8WVF5 259 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 ASZ1Q8WWH4 475 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 MTBPQ96DY7 904 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 FAHD2AQ96GK7 314 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 SMIM10Q96HG1 83 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 RUNDC3BQ96NL0 473 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 CSF3RQ99062 836 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 C1QTNF4Q9BXJ3 329 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 PRTFDC1Q9NRG1 225 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 PLSCR4Q9NRQ2 329 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 DDX28Q9NUL7 540 aaKnown RBP3.72□□□□□ -1.81
CNN3-206ENST00000487539 NLE1Q9NVX2 485 aaPredicted RBP3.72□□□□□ -1.81
CNN3-206ENST00000487539 CNIH4Q9P003 139 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 SPATA7Q9P0W8 599 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 KIAA1456Q9P272 454 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 FETUBQ9UGM5 382 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 SLC2A6Q9UGQ3 507 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 MOKQ9UQ07 419 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 IKBKGQ9Y6K9 419 aa3.72□□□□□ -1.81
CNN3-206ENST00000487539 STAB2Q8WWQ8 2551 aa3.71□□□□□ -1.81
CNN3-206ENST00000487539 LCE6AA0A183 80 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 RBMY1BA6NDE4 496 aaKnown RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 RBMY1EA6NEQ0 496 aaKnown RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 SMTNL1A8MU46 457 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 C17orf105B2RV13 164 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 H7C0S8 307 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 M0QZ24 198 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 NDUFS4O43181 175 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ZIC3O60481 467 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 GCM2O75603 506 aaPredicted RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 RGS11O94810 467 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 STAMBPO95630 424 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 APOA4P06727 396 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 TACSTD2P09758 323 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 CSF3P09919 207 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 RBMY1DP0C7P1 496 aaKnown RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 TNNI3P19429 210 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 PRTN3P24158 256 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 CHMP24386 653 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 KDELR1P24390 212 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 PCGF2P35227 344 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 CASP3P42574 277 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 FABP6P51161 128 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 B3GALT5-AS1P59052 145 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 RPS15AP62244 130 aaKnown RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 DYNLT1P63172 113 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 CCZ1BP86790 482 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 CCZ1P86791 482 aaPredicted RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 EFNB1P98172 346 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ITGADQ13349 1161 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 HERC3Q15034 1050 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 NTRK2Q16620 822 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ANKRD20A4Q4UJ75 823 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ESCO2Q56NI9 601 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ANKRD20A2Q5SQ80 823 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ANKRD20A1Q5TYW2 823 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ANKRD20A3Q5VUR7 823 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 MFSD12Q6NUT3 480 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 TRIM40Q6P9F5 258 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 TTC23LQ6PF05 361 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ANGPTL8Q6UXH0 198 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 ZNF534Q76KX8 674 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 RRM2BQ7LG56 351 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 OR4N5Q8IXE1 308 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 PARP16Q8N5Y8 322 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 WDSUB1Q8N9V3 476 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 MFSD9Q8NBP5 474 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 MORN4Q8NDC4 146 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 PPHLN1Q8NEY8 458 aaKnown RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 OR5M1Q8NGP8 315 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 OR8K3Q8NH51 312 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 OR14L1PQ8NHC6 308 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 SNAPC3Q92966 411 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 TMEM186Q96B77 213 aa3.71□□□□□ -1.82
CNN3-206ENST00000487539 PPWD1Q96BP3 646 aaKnown RBP3.71□□□□□ -1.82
CNN3-206ENST00000487539 ELP4Q96EB1 424 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms