RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 FCRLBQ6BAA4 426 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 TMEM220Q6QAJ8 160 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 TSSK4Q6SA08 328 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF704Q6ZNC4 412 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 SLC16A13Q7RTY0 426 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CCDC36Q8IYA8 594 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 SVBPQ8N300 66 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 EID2Q8N6I1 236 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 OR14A16Q8NHC5 309 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 ARMC5Q96C12 935 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 SLC41A3Q96GZ6 507 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 PEX11GQ96HA9 241 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 AMDHD1Q96NU7 426 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 SLC22A12Q96S37 553 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 C1QTNF2Q9BXJ5 285 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CCDC86Q9H6F5 360 aaKnown RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 LHX9Q9NQ69 397 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 PRDM9Q9NQV7 894 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 ACSS1Q9NUB1 689 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 FOXJ3Q9UPW0 622 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 OR10H1Q9Y4A9 318 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 MTCL1Q9Y4B5 1905 aaKnown RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 TRAV14DV4A0A0A6YYC5 116 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CCL15-CCL14A0A0B4J2E2 113 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 TMEM272A0A1B0GTI8 110 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 BHLHE40O14503 412 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 AKR7A3O95154 331 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 RLN1P04808 185 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 IFNA4P05014 189 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 HMGN2P05204 90 aaKnown RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 TEAD1P28347 426 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 PPP2CBP62714 309 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 PPP2CAP67775 309 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 MAP2K5Q13163 448 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CBFBQ13951 182 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CCL15Q16663 113 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 SLC6A19Q695T7 634 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 DHRS7BQ6IAN0 325 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 GJD3Q8N144 294 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 DMBX1Q8NFW5 382 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 OR9A1PQ8NGU1 263 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 C1orf216Q8TAB5 229 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 OVCA2Q8WZ82 227 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 NR4A3Q92570 626 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 UBE2E3Q969T4 207 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 MCHR1Q99705 422 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CRB3Q9BUF7 120 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 DPH1Q9BZG8 443 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 BCL2L14Q9BZR8 327 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 NRIP3Q9NQ35 241 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 HCSTQ9UBK5 93 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 FBXL4Q9UKA2 621 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 SLC22A31A6NKX4 558 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 RFPL4AA6NLU0 287 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 RFPL4AL1F8VTS6 287 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SYT5O00445 386 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 YKT6O15498 198 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 OGG1O15527 345 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SULT1B1O43704 296 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 GREM1O60565 184 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 EOMESO95936 686 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 CTSAP10619 480 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 FOSL1P15407 271 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 RPL17P18621 184 aaKnown RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SRMP19623 302 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 ACADLP28330 430 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 PRLHRP49683 370 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 DCDP81605 110 aaKnown RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM115Q12893 351 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 IRF5Q13568 498 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 AGERQ15109 404 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM69Q5SWH9 247 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 MORN1Q5T089 497 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF546Q86UE3 836 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 FAM129CQ86XR2 697 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 CFAP206Q8IYR0 622 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SYNPRQ8TBG9 265 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SETD7Q8WTS6 366 aaKnown RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 BRI3BPQ8WY22 251 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 S100A16Q96FQ6 103 aaKnown RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 IL17FQ96PD4 163 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 MFRPQ9BY79 579 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 PITHD1Q9GZP4 211 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SLC38A1Q9H2H9 487 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 PIGMQ9H3S5 423 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 TMEM138Q9NPI0 162 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 POT1Q9NUX5 634 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 KLF15Q9UIH9 416 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 SLC7A7Q9UM01 511 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 A0A0G2JN53 185 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 UNC119BA6NIH7 251 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 GLOD5A6NK44 160 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 IFITM5A6NNB3 132 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 PRKRAO75569 313 aaKnown RBP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 GYPBP06028 91 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 CDK2P24941 298 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 CAPZA2P47755 286 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 NCBP2P52298 156 aaKnown RBP eCLIP9.83□□□□□ -0.84
CCDC171-208ENST00000486641 MLC1Q15049 377 aa9.83□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF750Q32MQ0 723 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms