RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 PSD2Q9BQI7 771 aa12.13□□□□□ -0.47
DCLK1-207ENST00000486239 CCDC106Q9BWC9 280 aa12.13□□□□□ -0.47
DCLK1-207ENST00000486239 NSRP1Q9H0G5 558 aaKnown RBP12.13□□□□□ -0.47
DCLK1-207ENST00000486239 ESRP2Q9H6T0 727 aaKnown RBP12.13□□□□□ -0.47
DCLK1-207ENST00000486239 WDR55Q9H6Y2 383 aaPredicted RBP12.13□□□□□ -0.47
DCLK1-207ENST00000486239 UBTD1Q9HAC8 227 aa12.13□□□□□ -0.47
DCLK1-207ENST00000486239 TRAPPC4Q9Y296 219 aa12.13□□□□□ -0.47
DCLK1-207ENST00000486239 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 GOLGA8QA0A0J9YX86 632 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 A0A1W2PNR3 127 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 A0A1W2PPR1 153 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 GOLGA8OA6NCC3 632 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 GOLGA8NF8WBI6 632 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 SMAD9O15198 467 aaKnown RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 SIAH2O43255 324 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 EIF1BO60739 113 aaKnown RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 GCM2O75603 506 aaPredicted RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 KITP10721 976 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 RPS4Y1P22090 263 aaKnown RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 POLR2HP52434 150 aaKnown RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 NME5P56597 212 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 CHRNEQ04844 493 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 MAPK14Q16539 360 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 LIN52Q52LA3 116 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 ABLIM2Q6H8Q1 611 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 ZNF704Q6ZNC4 412 aaPredicted RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 BIVMQ86UB2 503 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 MTDHQ86UE4 582 aaKnown RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
DCLK1-207ENST00000486239 TEX37Q96LM6 180 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 C7orf26Q96N11 449 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 KLHDC3Q9BQ90 382 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 SLC38A1Q9H2H9 487 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 CXorf56Q9H5V9 222 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 TMEM45AQ9NWC5 275 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 ACANP16112 2415 aa12.12□□□□□ -0.47
DCLK1-207ENST00000486239 CENPVL1A0A0U1RR11 272 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 FAM234BA2RU67 622 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 CFAP73A6NFT4 308 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 THBDP07204 575 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 THBS1P07996 1170 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 TFPIP10646 304 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 SLC1A3P43003 542 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 MRPL19P49406 292 aaKnown RBP12.11□□□□□ -0.47
DCLK1-207ENST00000486239 RNF144AP50876 292 aaPredicted RBP12.11□□□□□ -0.47
DCLK1-207ENST00000486239 POLR2JP52435 117 aaKnown RBP12.11□□□□□ -0.47
DCLK1-207ENST00000486239 SLC16A1P53985 500 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 FADDQ13158 208 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 LARS2Q15031 903 aaKnown RBP12.11□□□□□ -0.47
DCLK1-207ENST00000486239 RNF220Q5VTB9 566 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 PRAMEF8Q5VWM4 474 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 PRAMEF7Q5VXH5 474 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 ANKRD34AQ69YU3 496 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 WFDC8Q8IUA0 241 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 ZNF611Q8N823 705 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 SLC35B4Q969S0 331 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 S100PBPQ96BU1 408 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 CCT8L2Q96SF2 557 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 TMEM204Q9BSN7 226 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 GSX2Q9BZM3 304 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 QRSL1Q9H0R6 528 aaKnown RBP12.11□□□□□ -0.47
DCLK1-207ENST00000486239 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 TMEM181Q9P2C4 612 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 DSPPQ9NZW4 1301 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 FREM1Q5H8C1 2179 aa12.11□□□□□ -0.47
DCLK1-207ENST00000486239 VPS13CQ709C8 3753 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 A0A096LPI6 279 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 KLF4O43474 513 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 DIAPH2O60879 1101 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 PAX1P15863 534 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 COX5AP20674 150 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 PPIBP23284 216 aaKnown RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 LOXP28300 417 aaPredicted RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 IL12AP29459 219 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 RYKP34925 604 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 IDH2P48735 452 aaKnown RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 CASP9P55211 416 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 DSTNP60981 165 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 COPZ1P61923 177 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 SLC35A1P78382 337 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 SYPL1Q16563 259 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 KRTAP21-3Q3LHN1 58 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 Q5PR19 223 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 GKAP1Q5VSY0 366 aaPredicted RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 BHLHA15Q7RTS1 189 aaPredicted RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 ANKFN1Q8N957 763 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 APH1AQ96BI3 265 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 MUCL1Q96DR8 90 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 PLPPR2Q96GM1 343 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 C18orf12Q96KH6 178 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 NAA11Q9BSU3 229 aaPredicted RBP12.1□□□□□ -0.47
DCLK1-207ENST00000486239 INPP5KQ9BT40 448 aa12.1□□□□□ -0.47
DCLK1-207ENST00000486239 PIF1Q9H611 641 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms