RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 A0A0G2JMM0 328 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 A0A1W2PPB8 328 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 A0A1W2PRS3 328 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 ANKUB1A6NFN9 424 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 KIR3DP1A8MWS1 328 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 K7ENP7 123 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 GTPBP1O00178 669 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 ETV2O00321 342 aaPredicted RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 SNPHO15079 494 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 NOL3O60936 208 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 TRIM3O75382 744 aaPredicted RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 WISP1O95388 367 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 NTN1O95631 604 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 CRHBPP24387 322 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 EEF1B2P24534 225 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 SLC6A8P48029 635 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 CLK3P49761 638 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 DAPP51397 102 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 CCL11P51671 97 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 ISL1P61371 349 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 RPP38P78345 283 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.76
SND1-212ENST00000485871 ROR2Q01974 943 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 ST3GAL3Q11203 375 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 RAPSNQ13702 412 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 TRAM2Q15035 370 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 TOMM34Q15785 309 aaPredicted RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 AGAP7PQ5VUJ5 663 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 INO80CQ6PI98 192 aaPredicted RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 CCDC81Q6ZN84 652 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 LINC00696Q6ZRV3 163 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 PSD4Q8NDX1 1056 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 OR2M3Q8NG83 312 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 OR52J3Q8NH60 311 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 SLC7A13Q8TCU3 470 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 C3orf49Q96BT1 292 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 SH3YL1Q96HL8 342 aaPredicted RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 AGAP4Q96P64 663 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 ALPK1Q96QP1 1244 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 FNDC11Q9BVV2 318 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 ADAM19Q9H013 955 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 PAPOLBQ9NRJ5 636 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 LRFN1Q9P244 771 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 ABI3Q9P2A4 366 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 NDRG4Q9ULP0 352 aaKnown RBP10.29□□□□□ -0.76
SND1-212ENST00000485871 SLC7A7Q9UM01 511 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 GMPPBQ9Y5P6 360 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 SNX5Q9Y5X3 404 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 CEPT1Q9Y6K0 416 aa10.29□□□□□ -0.76
SND1-212ENST00000485871 TENM4Q6N022 2769 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 A0A087WUU8 490 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SH3PXD2BA1X283 911 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 OR5H15A6NDH6 313 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 LRRC3CA6NJW4 275 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 A6NL46 340 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 CHP2O43745 196 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SNX4O95219 450 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 CLIC3O95833 236 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 F10P00742 488 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 PRKACGP22612 351 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 CBLP22681 906 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 MSX1P28360 303 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 IDH2P48735 452 aaKnown RBP10.28□□□□□ -0.76
SND1-212ENST00000485871 NPRL3Q12980 569 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 MICAQ29983 383 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SLC25A53Q5H9E4 307 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SPINK14Q6IE38 97 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 OR5M10Q6IEU7 315 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 PODNL1Q6PEZ8 512 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 ATG4DQ86TL0 474 aaPredicted RBP10.28□□□□□ -0.76
SND1-212ENST00000485871 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 PARP8Q8N3A8 854 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 TMCO5AQ8N6Q1 288 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 OR10G2Q8NGC3 310 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SNRNP27Q8WVK2 155 aaKnown RBP10.28□□□□□ -0.76
SND1-212ENST00000485871 IPCEF1Q8WWN9 437 aaPredicted RBP10.28□□□□□ -0.76
SND1-212ENST00000485871 ACOT11Q8WXI4 607 aaPredicted RBP10.28□□□□□ -0.76
SND1-212ENST00000485871 HAS2Q92819 552 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SLC38A4Q969I6 547 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 HRASLS5Q96KN8 279 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SMAD5Q99717 465 aaKnown RBP10.28□□□□□ -0.76
SND1-212ENST00000485871 NPAS1Q99742 590 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 UTP23Q9BRU9 249 aaKnown RBP10.28□□□□□ -0.76
SND1-212ENST00000485871 ADNPQ9H2P0 1102 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 RIBC2Q9H4K1 309 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 C12orf10Q9HB07 376 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 TMEM27Q9HBJ8 222 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SDHAF3Q9NRP4 125 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 SACM1LQ9NTJ5 587 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 PLA2G3Q9NZ20 509 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 MED11Q9P086 117 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 PPP4R1LQ9P1A2 415 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 FBXL2Q9UKC9 423 aa10.28□□□□□ -0.76
SND1-212ENST00000485871 PINLYPA6NC86 204 aa10.27□□□□□ -0.77
SND1-212ENST00000485871 E9PQ18 207 aa10.27□□□□□ -0.77
SND1-212ENST00000485871 G3V3Y1 287 aa10.27□□□□□ -0.77
SND1-212ENST00000485871 PYCARD-AS1I3L0S3 204 aa10.27□□□□□ -0.77
SND1-212ENST00000485871 SLC1A7O00341 560 aa10.27□□□□□ -0.77
SND1-212ENST00000485871 MPZL2O60487 215 aa10.27□□□□□ -0.77
SND1-212ENST00000485871 CCNB2O95067 398 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms