RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ADAMDEC1O15204 470 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 CLDN14O95500 239 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 FESP07332 822 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 TMIGD3P0DMS9 266 aaPredicted RBP10.63□□□□□ -0.71
HPS4-214ENST00000485842 CXCR1P25024 350 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 HTR2AP28223 471 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 CEACAM8P31997 349 aaPredicted RBP10.63□□□□□ -0.71
HPS4-214ENST00000485842 KDELR2P33947 212 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 TIMP3P35625 211 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 AGFG1P52594 562 aaKnown RBP10.63□□□□□ -0.71
HPS4-214ENST00000485842 DLX5P56178 289 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 CARD18P57730 90 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 HSPB2Q16082 182 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 NRF1Q16656 503 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 CYBRD1Q53TN4 286 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 TRPM8Q7Z2W7 1104 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 RANBP3LQ86VV4 465 aaPredicted RBP10.63□□□□□ -0.71
HPS4-214ENST00000485842 ADGRG3Q86Y34 549 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 DEFB107AQ8IZN7 70 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 RNF217Q8TC41 542 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 RASSF5Q8WWW0 418 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 PROX1Q92786 737 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 OSTF1Q92882 214 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 C3orf49Q96BT1 292 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 INTS12Q96CB8 462 aaKnown RBP10.63□□□□□ -0.71
HPS4-214ENST00000485842 TM9SF2Q99805 663 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 ARHGDIGQ99819 225 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 WFDC6Q9BQY6 131 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 SRXN1Q9BYN0 137 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 TRIM2Q9C040 744 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 TIGARQ9NQ88 270 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 TMEM181Q9P2C4 612 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 TESQ9UGI8 421 aaKnown RBP10.63□□□□□ -0.71
HPS4-214ENST00000485842 ZNF175Q9Y473 711 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 MED12LQ86YW9 2145 aa10.63□□□□□ -0.71
HPS4-214ENST00000485842 A0A1B0GWA3 101 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 NKX2-6A6NCS4 301 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 B2RBV5 119 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 SULT2B1O00204 365 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 AQP8O94778 261 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 CLDN1O95832 211 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 LGI1O95970 557 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 IFNA14P01570 189 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 C8BP07358 591 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 FCGR2AP12318 317 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 NCK1P16333 377 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 TCN1P20061 433 aaPredicted RBP10.62□□□□□ -0.71
HPS4-214ENST00000485842 TNFRSF1BP20333 461 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 AGAP20933 346 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 BMP5P22003 454 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 CALB2P22676 271 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 SIRPAP78324 504 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 FOXF2Q12947 444 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 BNIP2Q12982 314 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 ZNF239Q16600 458 aaKnown RBP10.62□□□□□ -0.71
HPS4-214ENST00000485842 SAMD4BQ5PRF9 694 aaKnown RBP10.62□□□□□ -0.71
HPS4-214ENST00000485842 FAM156AQ8NDB6 213 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 RBM15BQ8NDT2 890 aaKnown RBP10.62□□□□□ -0.71
HPS4-214ENST00000485842 ROBO4Q8WZ75 1007 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 FAM162AQ96A26 154 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 DDIT4LQ96D03 193 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 TPD52L3Q96J77 140 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 UCN2Q96RP3 112 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 CDRT15Q96T59 188 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 MCHR1Q99705 422 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 ZNF559Q9BR84 538 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 ADAM19Q9H013 955 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 EVA1AQ9H8M9 152 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 TMEM27Q9HBJ8 222 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 PAQR5Q9NXK6 330 aaPredicted RBP10.62□□□□□ -0.71
HPS4-214ENST00000485842 SELENONQ9NZV5 590 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 EGFL7Q9UHF1 273 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 BAG5Q9UL15 447 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 SLC9A8Q9Y2E8 581 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 SH3GLB1Q9Y371 365 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 CACNA1CQ13936 2221 aa10.62□□□□□ -0.71
HPS4-214ENST00000485842 SPTBN1Q01082 2364 aaKnown RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 MPDZO75970 2070 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 IGHV3-15A0A0B4J1V0 119 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 ZC3H12DA2A288 527 aaKnown RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 ELOA3DA6NLF2 546 aaPredicted RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 CPSF4LA6NMK7 179 aaKnown RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 PRSS44E7EML9 344 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 DVL2O14641 736 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 UBOX5O94941 541 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 RCBTB2O95199 551 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 ZNF682O95780 498 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 PLGP00747 810 aaPredicted RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 GGT1P19440 569 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 CTSSP25774 331 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 DIO1P49895 249 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 MYBPHQ13203 477 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 OR1Q1Q15612 314 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 NPTX1Q15818 432 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 ELOA3BQ3SY89 546 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 OR2A2Q6IF42 318 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 DEF8Q6ZN54 512 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 RINLQ6ZS11 566 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 ATG4DQ86TL0 474 aaPredicted RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 CARM1Q86X55 608 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms